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PLM3_60_coex_sep16_scaffold_1022

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1022_1
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..417
DNA (417bp) protein (139aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00038035F1
Uncharacterized protein {ECO:0000313|EMBL:EPD66673.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1022_2
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(454..1362)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI000360D203
5'-3' exonuclease {ECO:0000313|EMBL:EPD96345.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
5'-3' exonuclease
PLM3_60_coex_sep16_scaffold_1022_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1494..2498
DNA (1005bp) protein (335aa)
Lytic transglycosylase Tax=Amycolatopsis mediterranei RepID=D8HM39_AMYMU
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AEK40011.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_60_coex_sep16_scaffold_1022_4
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2509..3825)
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RAQ2_9ACTO
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_60_coex_sep16_scaffold_1022_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3991..4812)
DNA (822bp) protein (274aa)
spermidine/putrescine ABC transporter permease Tax=Streptomyces sp. BoleA5 RepID=UPI0003620F5A
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ETK36443.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
spermidine/putrescine ABC transporter permease
PLM3_60_coex_sep16_scaffold_1022_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4812..5693)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MYR9_9ACTO
Spermidine/putrescine transporter permease {ECO:0000313|EMBL:EWM13013.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
spermidine/putrescine ABC transporter permease
PLM3_60_coex_sep16_scaffold_1022_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5698..6897)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MEW2_9ACTO
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK36441.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
spermidine/putrescine ABC transporter substrate-binding protein
PLM3_60_coex_sep16_scaffold_1022_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6900..7967)
DNA (1068bp) protein (356aa)
spermidine/putrescine ABC transporter ATP-binding protein Tax=Streptomyces sp. FxanaD5 RepID=UPI0003622E29
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK36440.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
spermidine/putrescine ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_1022_9
unknown

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comp(8053..8466)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1022_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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8565..9296
DNA (732bp) protein (244aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Pirin-related protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1022_11
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9381..9851
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Bacterioferritin Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNL2_HALO1
bacterioferritin
PLM3_60_coex_sep16_scaffold_1022_12
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9848..10045)
DNA (198bp) protein (66aa)
NAD(P)H-nitrite reductase Tax=Frankia sp. QA3 RepID=I9KAR4_9ACTO
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EIV90990.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
nirB3; nitrite reductase large subunit nirb3
PLM3_60_coex_sep16_scaffold_1022_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10088..11056)
DNA (969bp) protein (323aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037DCD27
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:AIC16370.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_60_coex_sep16_scaffold_1022_14
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11210..12676
DNA (1467bp) protein (489aa)
succinate semialdehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase Tax=Saccharomonospora marina XMU15 RepID=H5X7Y8_9PSEU
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EHR52488.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
PLM3_60_coex_sep16_scaffold_1022_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12698..14290
DNA (1593bp) protein (531aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Apolipoprotein N-acyltransferase Tax=Frankia sp. (strain EAN1pec) RepID=A8LFK3_FRASN
apolipoprotein N-acyltransferase
PLM3_60_coex_sep16_scaffold_1022_16
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14322..15437
DNA (1116bp) protein (372aa)
6-phosphofructokinase {ECO:0000313|EMBL:ABX07131.1}; EC=2.7.1.11 {ECO:0000313|EMBL:ABX07131.1};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
6-phosphofructokinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZS7_HERA2
6-phosphofructokinase
PLM3_60_coex_sep16_scaffold_1022_17
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15415..16134)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Rhodococcus opacus (strain B4) RepID=C1B5P0_RHOOB
hypothetical protein
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_60_coex_sep16_scaffold_1022_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16142..16678)
DNA (537bp) protein (179aa)
Putative acetyl-CoA synthetase {ECO:0000313|EMBL:EHN12055.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EHN12055.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Putative acetyl-CoA synthetase Tax=Patulibacter medicamentivorans RepID=H0E2P1_9ACTN
CoA-binding domain-containing protein
PLM3_60_coex_sep16_scaffold_1022_19
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16794..17162
DNA (369bp) protein (123aa)
Transcriptional regulator, putative ATPase, winged helix family Tax=Frankia sp. CN3 RepID=G6H9W7_9ACTO
afsR; afsR transcriptional regulator
AfsR transcriptional regulator {ECO:0000313|EMBL:CCG04190.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_1022_20
unknown

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17159..17308
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1022_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

17319..18065
DNA (747bp) protein (249aa)
Protein tyrosine/serine phosphatase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIH8_THET1
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ACZ43549.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3_60_coex_sep16_scaffold_1022_22
unknown

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18265..18348
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 22 items

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