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PLM3_60_coex_sep16_scaffold_1032

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1032_1
unknown

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2..265
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1032_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(427..1926)
DNA (1500bp) protein (500aa)
hypothetical protein, partial Tax=Gemmata obscuriglobus RepID=UPI00016C530B
Uncharacterized protein {ECO:0000313|EMBL:ELP30976.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK14.;"
transposase-like protein
PLM3_60_coex_sep16_scaffold_1032_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2011..2292
DNA (282bp) protein (94aa)
Delta fatty acid desaturase Tax=Streptomyces sp. AA4 RepID=D9UWU6_9ACTO
Delta fatty acid desaturase {ECO:0000313|EMBL:EFL06384.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
fatty acid desaturase
PLM3_60_coex_sep16_scaffold_1032_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2539..4179
DNA (1641bp) protein (547aa)
Carbamoyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY41_RUBXD
carbamoyltransferase
Carbamoyltransferase {ECO:0000313|EMBL:ABG03687.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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4176..5339
DNA (1164bp) protein (388aa)
transferase Tax=Streptomyces chartreusis RepID=UPI000262E9D8
HAD family hydrolase
HAD-superfamily hydrolase subfamily IIIA {ECO:0000313|EMBL:ABG03686.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5336..6409
DNA (1074bp) protein (358aa)
Glycosyl transferase, family 9 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY43_RUBXD
glycosyl transferase family protein
Glycosyl transferase, family 9 {ECO:0000313|EMBL:ABG03685.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6406..7362
DNA (957bp) protein (319aa)
Glycosyl transferase, group 1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY44_RUBXD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABG03684.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7359..8576
DNA (1218bp) protein (406aa)
Glycosyl transferase, group 1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY45_RUBXD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABG03683.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8573..9979
DNA (1407bp) protein (469aa)
RfaE bifunctional protein, domain II Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY47_RUBXD
bifunctional ADP-heptose synthase
Bifunctional protein HldE {ECO:0000256|SAAS:SAAS00232998}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_10
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9966..10658
DNA (693bp) protein (231aa)
Putative short chain dehydrogenase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YX47_NOCFA
Short-chain dehydrogenase {ECO:0000313|EMBL:KEI45825.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
short chain dehydrogenase
PLM3_60_coex_sep16_scaffold_1032_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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10649..11710
DNA (1062bp) protein (354aa)
Glycosyl transferase, family 9 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY48_RUBXD
glycosyl transferase family protein
Glycosyl transferase, family 9 {ECO:0000313|EMBL:ABG03680.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1032_12
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12174..12452
DNA (279bp) protein (93aa)
Polysaccharide pyruvyl transferase Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J5K4_9PSEU
Polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ACU96185.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM3_60_coex_sep16_scaffold_1032_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12449..13351
DNA (903bp) protein (301aa)
Glycosyl transferase family 2 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAW4_THEBD
Putative transferase {ECO:0000313|EMBL:EWC63205.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
family 2 glycosyl transferase
PLM3_60_coex_sep16_scaffold_1032_14
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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13652..14128
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WCL0_KINRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS04549.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM3_60_coex_sep16_scaffold_1032_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14379..15350
DNA (972bp) protein (324aa)
Short-chain dehydrogenase/reductase SDR Tax=Pedosphaera parvula Ellin514 RepID=B9XNC1_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF58674.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
short-chain dehydrogenase
PLM3_60_coex_sep16_scaffold_1032_16
unknown

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comp(15229..15939)
DNA (711bp) protein (237aa)

This feature has no annotations

Displaying 16 items

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