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PLM3_60_coex_sep16_scaffold_1471

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1471_1
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..327
DNA (327bp) protein (109aa)
membrane protein Tax=Sphingomonas melonis RepID=UPI00035CCC9A
Nodulin-like protein {ECO:0000313|EMBL:KCZ94317.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
nodulin 21 protein
PLM3_60_coex_sep16_scaffold_1471_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1440..1994
DNA (555bp) protein (185aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ADB73395.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ADB73395.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Hypoxanthine phosphoribosyltransferase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S795_GEOOG
PLM3_60_coex_sep16_scaffold_1471_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2022..3068
DNA (1047bp) protein (349aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:ADP83859.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ADP83859.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Adenosine deaminase Tax=Frankia sp. (strain EuI1c) RepID=E3IYB4_FRASU
PLM3_60_coex_sep16_scaffold_1471_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(3086..5416)
DNA (2331bp) protein (777aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
PLM3_60_coex_sep16_scaffold_1471_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5413..5886)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6G9_STRRD
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KDN17469.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1471_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(5893..6765)
DNA (873bp) protein (291aa)
Molybdopterin dehydrogenase, FAD-binding protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS80_RUBXD
molybdopterin dehydrogenase protein
Molybdopterin dehydrogenase, FAD-binding protein {ECO:0000313|EMBL:ABG05748.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1471_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6822..8306)
DNA (1485bp) protein (495aa)
MFS transporter Tax=Streptomyces vitaminophilus RepID=UPI0003661DA9
hypoxanthine/guanine permease
Hypoxanthine/guanine permease {ECO:0000313|EMBL:ADI11237.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3_60_coex_sep16_scaffold_1471_8
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8440..9132
DNA (693bp) protein (231aa)
Crp/Fnr family transcription regulator Tax=Actinoplanes globisporus RepID=UPI00035DC1B0
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EEP70930.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM3_60_coex_sep16_scaffold_1471_9
unknown

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comp(9140..9451)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1471_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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9614..10294
DNA (681bp) protein (227aa)
Crp family transcriptional regulator Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHB1_MICPN
Crp/Fnr family transcriptional regulator
Crp family transcriptional regulator {ECO:0000313|EMBL:BAK38119.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_1471_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10425..11270
DNA (846bp) protein (282aa)
Glucose 1-dehydrogenase 2 Tax=Cesiribacter andamanensis AMV16 RepID=M7N7B1_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKF18726.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
short-chain dehydrogenase/reductase
PLM3_60_coex_sep16_scaffold_1471_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11427..12644
DNA (1218bp) protein (406aa)
N-acetylglucosaminyltransferase Tax=Rhizobiaceae RepID=G9AD56_RHIFH
nodC; N-acetylglucosaminyltransferase
NodC {ECO:0000313|EMBL:AAY89044.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (Sinorhizobium fredii).;"
PLM3_60_coex_sep16_scaffold_1471_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(12634..15795)
DNA (3162bp) protein (1054aa)
cyaI2; adenylate/guanylate cyclase (EC:4.6.1.1) bin=bin8_Chloro species=Rhizobium grahamii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1471_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(15859..18984)
DNA (3126bp) protein (1042aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1471_15
unknown

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19175..19351
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 15 items

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