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PLM3_60_coex_sep16_scaffold_1561

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1561_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..512)
DNA (510bp) protein (170aa)
Putative Glycosyl transferase Tax=Modestobacter marinus (strain BC501) RepID=I4EWH5_MODMB
glycosyl transferase
Putative Glycosyl transferase {ECO:0000313|EMBL:CCH87738.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_1561_2
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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648..1244
DNA (597bp) protein (199aa)
hypothetical protein Tax=Arthrobacter sp. TB 23 RepID=UPI0002D3A439
Uncharacterized protein {ECO:0000313|EMBL:EPH42049.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1561_3
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1330..3606
DNA (2277bp) protein (759aa)
ABC transporter Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XUU2_9PSEU
Daunorubicin resistance protein DrrC {ECO:0000313|EMBL:KFZ79966.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
ABC transporter-like protein
PLM3_60_coex_sep16_scaffold_1561_4
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3628..3999
DNA (372bp) protein (124aa)
glyoxalase Tax=Frankia sp. Iso899 RepID=UPI0003B70EEB
Glyoxalase {ECO:0000313|EMBL:KDN74235.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_60_coex_sep16_scaffold_1561_5
unknown

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4137..4334
DNA (198bp) protein (66aa)
NADP oxidoreductase coenzyme f420-dependent
PLM3_60_coex_sep16_scaffold_1561_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4601..5056
DNA (456bp) protein (152aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SF31_GEOOG
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB74721.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_1561_7
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5117..6355
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036E337A
Two component system sensor kinase {ECO:0000313|EMBL:EWS89911.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
two component system sensor kinase
PLM3_60_coex_sep16_scaffold_1561_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6352..7305
DNA (954bp) protein (318aa)
Family 3 adenylate cyclase Tax=Mycobacterium smegmatis JS623 RepID=L0J7V6_MYCSM
family 3 adenylate cyclase
Family 3 adenylate cyclase {ECO:0000313|EMBL:AGB26958.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM3_60_coex_sep16_scaffold_1561_9
unknown

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comp(7902..8303)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1561_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8542..9300
DNA (759bp) protein (253aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000361BF50
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63384.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
glycosyl transferase
PLM3_60_coex_sep16_scaffold_1561_11
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9382..9576)
DNA (195bp) protein (65aa)
Beta-lactamase domain protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JQL5_SACES
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:CCH27961.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_60_coex_sep16_scaffold_1561_12
unknown

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9694..10035
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1561_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9882..12494)
DNA (2613bp) protein (871aa)
Replicative DNA helicase {ECO:0000313|EMBL:CEL15943.1}; EC=3.6.1.- {ECO:0000313|EMBL:CEL15943.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Replicative DNA helicase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S810_GEOOG
replicative DNA helicase
PLM3_60_coex_sep16_scaffold_1561_14
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12523..12969)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RL9_ACIC1
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_1561_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12980..13150)
DNA (171bp) protein (57aa)
30S ribosomal protein S18 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RS18_ACIC1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying 15 items

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