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PLM3_60_coex_sep16_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_124_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..355)
DNA (354bp) protein (118aa)
Peptidase S15 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXN4_PSEUX
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:AEA27617.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_124_2
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(372..680)
DNA (309bp) protein (103aa)
SnoaL-like polyketide cyclase Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RKF4_MYCRN
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AEV73556.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_60_coex_sep16_scaffold_124_3
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1362..3497)
DNA (2136bp) protein (712aa)
Alpha/beta hydrolase fold protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BXQ7_BEUC1
Alpha/beta hydrolase {ECO:0000313|EMBL:KGN40567.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
alpha/beta hydrolase fold protein
PLM3_60_coex_sep16_scaffold_124_4
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3540..4127)
DNA (588bp) protein (196aa)
OsmC family protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S7M5_INTC7
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ADU46920.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_60_coex_sep16_scaffold_124_5
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4233..5429)
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000380F2D2
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADU46919.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_60_coex_sep16_scaffold_124_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5588..6235
DNA (648bp) protein (216aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037A0080
TetR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_124_7

Not on your lists

6210..8303
DNA (2094bp) protein (698aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035F949B
Uncharacterized protein {ECO:0000313|EMBL:KKM61399.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha/beta hydrolase fold protein
PLM3_60_coex_sep16_scaffold_124_8
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8340..8558
DNA (219bp) protein (73aa)
Binding-protein-dependent transport systems inner membrane component Tax=Jannaschia sp. (strain CCS1) RepID=Q28KP0_JANSC
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD56722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
PLM3_60_coex_sep16_scaffold_124_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8963..9292
DNA (330bp) protein (110aa)
regulatory protein ArsR bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
regulatory protein ArsR
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_60_coex_sep16_scaffold_124_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

9292..9777
DNA (486bp) protein (162aa)
activator of Hsp90 ATPase 1 family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
activator of Hsp90 ATPase 1 family protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_60_coex_sep16_scaffold_124_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

9774..10199
DNA (426bp) protein (142aa)
hypothetical protein bin=bin8_Chloro species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_124_12
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10896..12338
DNA (1443bp) protein (481aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI000382CB58
Aldehyde dehydrogenase {ECO:0000313|EMBL:EWT01628.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Lactaldehyde dehydrogenase
PLM3_60_coex_sep16_scaffold_124_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12382..14349
DNA (1968bp) protein (656aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI000370DBDF
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:EWT01629.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
PLM3_60_coex_sep16_scaffold_124_14
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14346..15173
DNA (828bp) protein (276aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036F22F7
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EWT01630.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase
PLM3_60_coex_sep16_scaffold_124_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15170..16441
DNA (1272bp) protein (424aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI000382B968
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EWT01631.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
oxidoreductase
PLM3_60_coex_sep16_scaffold_124_16
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16434..17513
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036F6357
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:GAB12633.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
LacI family transcriptional regulator
PLM3_60_coex_sep16_scaffold_124_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17510..18475
DNA (966bp) protein (322aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003789414
Oxidoreductase {ECO:0000313|EMBL:EWT01632.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
D-3-phosphoglycerate dehydrogenase
PLM3_60_coex_sep16_scaffold_124_18
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18476..19252
DNA (777bp) protein (259aa)
short-chain dehydrogenase Tax=Streptomyces viridosporus RepID=UPI000300FA52
Short-chain dehydrogenase {ECO:0000313|EMBL:KDN72517.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
short chain dehydrogenase
PLM3_60_coex_sep16_scaffold_124_19
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19267..20268
DNA (1002bp) protein (334aa)
Putative myo-inositol 2-dehydrogenase Tax=Streptomyces avermitilis RepID=Q826K3_STRAW
Dehydrogenase {ECO:0000313|EMBL:KKA37886.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
oxidoreductase
PLM3_60_coex_sep16_scaffold_124_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20265..21164
DNA (900bp) protein (300aa)
myo-inosose-2 dehydratase (EC:4.2.1.44)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00036A1451
Inosose dehydratase {ECO:0000313|EMBL:EWT01635.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
PLM3_60_coex_sep16_scaffold_124_21
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21164..22267
DNA (1104bp) protein (368aa)
oxidoreductase Tax=Streptomyces chartreusis RepID=UPI000262E81F
Oxidoreductase {ECO:0000313|EMBL:KDN72519.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
oxidoreductase
PLM3_60_coex_sep16_scaffold_124_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22680..26222
DNA (3543bp) protein (1181aa)
LuxR family transcriptional regulator Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSZ0_9ACTO
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AGZ39984.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_124_23

Not on your lists

comp(26689..27381)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Burkholderia ubonensis RepID=UPI00016A5D28
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49084.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_124_24
unknown

Not on your lists

28232..28771
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_124_25
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

28823..29410
DNA (588bp) protein (196aa)
Tax=BJP_IG2102_Coriobacteriales_64_17
PLM3_60_coex_sep16_scaffold_124_26
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29455..30117
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EF65_AMYSD
Uncharacterized protein {ECO:0000313|EMBL:KGN42187.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_124_27
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30609..30989
DNA (381bp) protein (127aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXH6_KRIFD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB29824.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_124_28
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31352..32791)
DNA (1440bp) protein (480aa)
Collagenase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZU8_9ACTO
collagenase
Collagenase {ECO:0000313|EMBL:AGZ41245.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_124_29
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32975..34402)
DNA (1428bp) protein (476aa)
Collagenase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZU8_9ACTO
collagenase
Collagenase {ECO:0000313|EMBL:AGZ41245.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_124_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(35345..36580)
DNA (1236bp) protein (412aa)
Kelch motif protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP4_CHLTF
Kelch motif protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 35 in total

View Taxonomy