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PLM3_60_coex_sep16_scaffold_432

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_432_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2..679
DNA (678bp) protein (226aa)
Aminoglycoside phosphotransferase Tax=Frankia sp. (strain EuI1c) RepID=E3IXM2_FRASU
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADP79039.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_432_2
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

676..2841
DNA (2166bp) protein (722aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
glgB; 1,4-alpha-glucan branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB Tax=Streptomyces sp. AA4 RepID=D9UY40_9ACTO
PLM3_60_coex_sep16_scaffold_432_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2838..4511
DNA (1674bp) protein (558aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000380CF03
malto-oligosyltrehalose trehalohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_432_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4583..5971
DNA (1389bp) protein (463aa)
Uncharacterized protein Tax=Rhodococcus opacus (strain B4) RepID=C1BDH8_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH47031.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM3_60_coex_sep16_scaffold_432_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5981..7033
DNA (1053bp) protein (351aa)
Hao; hydroxyacid oxidase 1 (EC:1.1.3.15)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037EB2CC
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:KFE68210.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
PLM3_60_coex_sep16_scaffold_432_6
unknown

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7046..7375
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_432_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7372..8046
DNA (675bp) protein (225aa)
AzlC family protein Tax=Streptomyces somaliensis RepID=UPI00029ADBCA
AzlC family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_432_8
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8043..8354
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZJA2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH43651.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
Putative membrane protein
PLM3_60_coex_sep16_scaffold_432_9
unknown

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comp(8399..8836)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_432_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9002..9820
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3ITV7_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP80004.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_432_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9817..11001)
DNA (1185bp) protein (395aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:ABG05001.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABG05001.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
3-ketoacyl-CoA thiolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC7_RUBXD
PLM3_60_coex_sep16_scaffold_432_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11052..13457)
DNA (2406bp) protein (802aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABG05002.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABG05002.1};; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
3-hydroxyacyl-CoA dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC6_RUBXD
PLM3_60_coex_sep16_scaffold_432_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13566..14507)
DNA (942bp) protein (314aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z900_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS85935.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM3_60_coex_sep16_scaffold_432_14
unknown

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14702..14839
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_432_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14909..15766
DNA (858bp) protein (286aa)
aldo/keto reductase Tax=Streptomyces sp. AA0539 RepID=UPI000315DD52
Aldo/keto reductase {ECO:0000313|EMBL:ETK31382.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
aldo/keto reductase
PLM3_60_coex_sep16_scaffold_432_16
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15768..17474)
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037DB911
EmrB/QacA subfamily drug resistance transporter
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:AFT99441.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM3_60_coex_sep16_scaffold_432_17
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17471..18100)
DNA (630bp) protein (210aa)
Putative transcriptional regulator, TetR family Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBV3_STRRD
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF68566.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_432_18
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(18158..18619)
DNA (462bp) protein (154aa)
Blue (Type 1) copper domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN01_9CHLR
blue (type 1) copper domain-containing protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3_60_coex_sep16_scaffold_432_19
Streptomyces sp. MBRL 10, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18727..19662
DNA (936bp) protein (312aa)
ABC transporter Tax=Streptomyces sp. Mg1 RepID=B4UXH7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIX79441.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 10.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_432_20
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19659..20483
DNA (825bp) protein (275aa)
Putative uncharacterized protein Tax=Streptomyces sp. Mg1 RepID=B4UXH6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDX20541.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
ABC-2 type transporter
PLM3_60_coex_sep16_scaffold_432_21
unknown

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20480..21193
DNA (714bp) protein (238aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_432_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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21190..22254
DNA (1065bp) protein (355aa)
Luciferase-like, subgroup Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV21_9CHLR
Luciferase-like, subgroup {ECO:0000313|EMBL:EFH84121.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
luciferase-like protein
PLM3_60_coex_sep16_scaffold_432_23
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

22229..23287
DNA (1059bp) protein (353aa)
Daunorubicin resistance ABC transporter ATP-binding subunit Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV76_RUBXD
daunorubicin resistance ABC transporter ATP-binding subunit
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:ABG04702.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_432_24
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

23284..24117
DNA (834bp) protein (278aa)
ABC-2 type transporter Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV75_RUBXD
ABC-type multidrug transport system permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_432_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24153..26612
DNA (2460bp) protein (820aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J3K5_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP78207.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_432_26
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26605..28284
DNA (1680bp) protein (560aa)
Type III restriction protein res subunit Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8E5_GEOOG
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ADB73567.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_432_27
unknown

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comp(28360..28962)
DNA (603bp) protein (201aa)

This feature has no annotations

Displaying 27 items

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