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PLM3_60_coex_sep16_scaffold_580

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_580_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

3..437
DNA (435bp) protein (145aa)
hypothetical protein bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_580_2
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(434..1948)
DNA (1515bp) protein (505aa)
Transposase, IS605 OrfB family Tax=Mycobacterium tusciae JS617 RepID=H1K5Y6_9MYCO
Transposase {ECO:0000313|EMBL:CDP84572.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
transposase
PLM3_60_coex_sep16_scaffold_580_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

2121..3065
DNA (945bp) protein (315aa)
hypothetical protein bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Ser/Thr protein phosphatase family protein
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_580_4
unknown

Not on your lists

comp(3754..4026)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_580_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

4209..4622
DNA (414bp) protein (138aa)
amino acid permease-associated protein bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
amino acid permease-associated protein
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_580_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4725..6173
DNA (1449bp) protein (483aa)
nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABG03727.1}; EC=1.2.1.9 {ECO:0000313|EMBL:ABG03727.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY01_RUBXD
PLM3_60_coex_sep16_scaffold_580_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6293..6670)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00037A1432
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK33165.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM3_60_coex_sep16_scaffold_580_8
unknown

Not on your lists

comp(7115..7402)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_580_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7540..8673
DNA (1134bp) protein (378aa)
Sarcosine dehydrogenase Tax=Leptolyngbya sp. Heron Island J RepID=U9W0A0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETW97204.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
FAD dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_580_10
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8680..9387
DNA (708bp) protein (236aa)
Putative cobalamin binding protein Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZXV0_9PROT
Putative cobalamin binding protein {ECO:0000313|EMBL:EHI49281.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
metH; Corrinoid methyltransferase
PLM3_60_coex_sep16_scaffold_580_11
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9384..10031
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM47427.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
hypothetical protein bin=bin8_Chloro species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Protein of unknown function (DUF1638)
PLM3_60_coex_sep16_scaffold_580_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10028..10960
DNA (933bp) protein (311aa)
hypothetical protein
hypothetical protein bin=bin8_Chloro species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Methyltetrahydrofolate:corrinoid methyltransferase {ECO:0000313|EMBL:KGM35508.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
PLM3_60_coex_sep16_scaffold_580_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

10957..13005
DNA (2049bp) protein (683aa)
fdx; ferredoxin, 2Fe-2S iron-sulfur cluster binding domain protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
fdx; ferredoxin, 2Fe-2S iron-sulfur cluster binding domain protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_580_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

13002..14546
DNA (1545bp) protein (515aa)
trimethylamine methyltransferase subfamily protein bin=bin8_Chloro species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
trimethylamine methyltransferase subfamily protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_580_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14551..15096
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUS2_ACIC1
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK53182.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_580_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..16035)
DNA (930bp) protein (310aa)
Phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Cellulomonas flavigena genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_580_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16039..16653)
DNA (615bp) protein (205aa)
CDP-alcohol phosphatidyltransferase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EWC41703.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
ynbA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
PLM3_60_coex_sep16_scaffold_580_18
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16654..17241)
DNA (588bp) protein (196aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI000362C681
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AJT64210.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM3_60_coex_sep16_scaffold_580_19
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17256..19922)
DNA (2667bp) protein (889aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0G849_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK39871.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_60_coex_sep16_scaffold_580_20
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20088..21413
DNA (1326bp) protein (442aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUS1_ACIC1
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABK53181.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_580_21
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

21446..23209
DNA (1764bp) protein (588aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_580_22
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23290..23850
DNA (561bp) protein (187aa)
RNA polymerase sigma factor Tax=Amycolatopsis mediterranei RepID=D8I877_AMYMU
rpoE; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:AEK39874.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_60_coex_sep16_scaffold_580_23
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23882..24376
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUS3_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53183.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_580_24
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24598..24888
DNA (291bp) protein (97aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000379CDCF
Membrane protein {ECO:0000313|EMBL:KHL02911.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
putative membrane-associated protein
PLM3_60_coex_sep16_scaffold_580_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

24972..28310
DNA (3339bp) protein (1113aa)
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:EFH82103.1}; EC=3.2.1.3 {ECO:0000313|EMBL:EFH82103.1};; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Glucan 1,4-alpha-glucosidase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZW3_9CHLR
glucan 1,4-alpha-glucosidase
PLM3_60_coex_sep16_scaffold_580_26
unknown

Not on your lists

28488..29180
DNA (693bp) protein (231aa)

This feature has no annotations

Displaying 26 items

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