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PLM3_60_coex_sep16_scaffold_7060

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7060_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3..857)
DNA (855bp) protein (285aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HX45_9PSEU
ruvB; holliday junction DNA helicase RuvB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7060_2
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(854..1444)
DNA (591bp) protein (197aa)
Holliday junction DNA helicase RuvA Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037DD605
Holliday junction ATP-dependent DNA helicase RuvA
Holliday junction DNA helicase RuvA {ECO:0000313|EMBL:AKG41758.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
PLM3_60_coex_sep16_scaffold_7060_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1441..2034)
DNA (594bp) protein (198aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Holliday junction resolvase Tax=Kribbella catacumbae RepID=UPI000360AD65
crossover junction endodeoxyribonuclease RuvC
PLM3_60_coex_sep16_scaffold_7060_4
unknown

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comp(2216..2830)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7060_5
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2860..3432)
DNA (573bp) protein (191aa)
CmnU Tax=Streptomyces capreolus RepID=A6YEH1_STRCP
16S rRNA (Adenine(1408)-N(1))-methyltransferase {ECO:0000313|EMBL:CDO27110.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7060_6
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3661..4407)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein HMPREF1486_00840 Tax=Streptomyces sp. HPH0547 RepID=S3BBI5_9ACTO
Probable transcriptional regulatory protein LK11_34675 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7060_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(4444..5073)
DNA (630bp) protein (210aa)
pdxT; glutamine amidotransferase subunit pdxT (EC:2.6.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Glutamine amidotransferase subunit PdxT Tax=Modestobacter marinus (strain BC501) RepID=I4EZG1_MODMB
PLM3_60_coex_sep16_scaffold_7060_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5076..5909)
DNA (834bp) protein (278aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Pyridoxal biosynthesis lyase PdxS Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUL0_ACIC1
pyridoxal biosynthesis lyase PdxS
PLM3_60_coex_sep16_scaffold_7060_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5927..6970)
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LR88_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK51948.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_7060_10
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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comp(6972..7703)
DNA (732bp) protein (244aa)
htpX; putative protease HtpX (EC:3.4.24.-)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000364973B
PLM3_60_coex_sep16_scaffold_7060_11
unknown

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comp(7700..8152)
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7060_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(8216..8617)
DNA (402bp) protein (134aa)
Glycosyl transferase group 1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6W0_SPHTD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACZ37721.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Displaying 12 items

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