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PLM3_60_coex_sep16_scaffold_7473

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7473_1
unknown

Not on your lists

comp(2..235)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7473_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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505..1797
DNA (1293bp) protein (431aa)
carbohydrate kinase Tax=Salinispora pacifica RepID=UPI00038275CB
carbohydrate kinase
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ABV98988.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM3_60_coex_sep16_scaffold_7473_3
unknown

Not on your lists

1794..1955
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7473_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1970..3202
DNA (1233bp) protein (411aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_7473_5
unknown

Not on your lists

3235..3477
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7473_6
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3481..4170)
DNA (690bp) protein (230aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000255|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Short=PRI {ECO:0000255|HAMAP-Rule:MF_00170};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
Ribose-5-phosphate isomerase A Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=RPIA_SYNJA
PLM3_60_coex_sep16_scaffold_7473_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4167..4787)
DNA (621bp) protein (207aa)
Phosphoglycerate mutase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA36_CONWI
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADB53131.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_7473_8
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5042..6673
DNA (1632bp) protein (544aa)
Medium-chain fatty-acid-CoA ligase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67T49_SYMTH
medium-chain fatty-acid-CoA ligase
Medium-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:BAD39144.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM3_60_coex_sep16_scaffold_7473_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6792..7514)
DNA (723bp) protein (241aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Arhodomonas aquaeolei RepID=UPI000375EFC0
Phosphoribosylaminoimidazole-succinocarboxamide synthase
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_7473_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7511..8809)
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXC0_RUBXD
Tax=CG_Solirubrobact_01
PLM3_60_coex_sep16_scaffold_7473_11
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8818..9282)
DNA (465bp) protein (155aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUK0_ACEAZ
PLM3_60_coex_sep16_scaffold_7473_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9328..9894)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3XXG4_SULBS
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_7473_13
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(9929..11206)
DNA (1278bp) protein (426aa)
phosphoribosylamine--glycine ligase Tax=Ornithinimicrobium pekingense RepID=UPI0003B36987
phosphoribosylamine/glycine ligase
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_7473_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11209..12387)
DNA (1179bp) protein (393aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Adenylosuccinate synthetase Tax=Frankia sp. CN3 RepID=G6H8L1_9ACTO
PLM3_60_coex_sep16_scaffold_7473_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12441..13379)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS39_9EURY
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_7473_16
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13376..14119)
DNA (744bp) protein (248aa)
Streptomycin adenylyltransferase, putative Tax=Cordyceps militaris (strain CM01) RepID=G3J6P8_CORMM
Um strain SMUC14 PROKKA_contig000002, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42151.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium immunogenum.;"
glycosyl transferase
PLM3_60_coex_sep16_scaffold_7473_17
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14143..15045)
DNA (903bp) protein (301aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000370F7E7
Uncharacterized protein {ECO:0000313|EMBL:EST18714.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7473_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15085..15327)
DNA (243bp) protein (81aa)
Redoxin domain protein Tax=Frankia sp. EUN1f RepID=D3D8G7_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7473_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15388..15696)
DNA (309bp) protein (103aa)
hypothetical protein
redoxin domain-containing protein bin=bin9_gal15 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_7473_20
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15790..16203
DNA (414bp) protein (138aa)
Glr1073 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLP8_GLOVI
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:KKR43407.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
large-conductive mechanosensitive channel
PLM3_60_coex_sep16_scaffold_7473_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16262..16375
DNA (114bp) protein (38aa)
geranylgeranyl reductase (EC:1.3.1.-)
geranylgeranyl reductase, partial Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE4A
Geranylgeranyl reductase {ECO:0000313|EMBL:ETK31647.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Displaying 21 items

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