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PLM3_60_coex_sep16_scaffold_726_12

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(9402..10097)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator Tax=Salinispora pacifica RepID=UPI00036DB07E similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 227.0
  • Bit_score: 305
  • Evalue 2.50e-80
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 228.0
  • Bit_score: 302
  • Evalue 6.00e-80
Regulatory protein LuxR {ECO:0000313|EMBL:AEB47209.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 228.0
  • Bit_score: 302
  • Evalue 3.00e-79

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAACCCGGAGGAGCGGTCCACCCCGGAGGGGTCCGGGGAACCCCAAGGGGGTGCCCCGGTGGGAACAAGCGTGTTCCTGGTCGACGACCATCACTTCTTCCTGGCGGGCCTCCGGGCCGAGCTGGGCGGGCAGTTCGAGATCGTCGGCGACGCCGCCGAGGTGGACGCCGCCGTGGACGGCATCCGTCGCACCCGGCCCGACGTGGTCCTGCTCGACGTGCACCTGCCCGGCGGCGGCGGCAGGGCGGTGCTGGAGGCGGTCCGCCAGACCCACCCGGAGATCCGCTTCCTCGCCCTCTCGGTGTCCGACGCGGCCGAGGACGTGATCGGGGTGATCCGTGCCGGCGCCCGCGGCTACGTGACCAAGACGATCTCGCCGCCCGACCTCGCCGCCGCGATCCGGCGGGTGGAGGGCGGCGACGCGGTGTTCTCCCCGCGGCTGGCCGGCTTCGTGCTCGACGCCTTCCACGGCGACCTCACCGGCGTCGTCGACCCCGAGCTGGACCAGCTCACCGCCAGGGAGCGCGAGGTGCTGCGCCACATCGCCCGCGGCTTCACCTACAAGGAGGTCGCGCGCCGCCTGCACCTGTCGGTGAAGACGGTCGAGACCCACGTCTCCTCGGTGCTGCGCAAGCTGCAGCTCTCCAGCCGCCACGAGCTGACCCGCTGGGCCAGCGACCGCCGGCTGGTGTAG
PROTEIN sequence
Length: 232
MNPEERSTPEGSGEPQGGAPVGTSVFLVDDHHFFLAGLRAELGGQFEIVGDAAEVDAAVDGIRRTRPDVVLLDVHLPGGGGRAVLEAVRQTHPEIRFLALSVSDAAEDVIGVIRAGARGYVTKTISPPDLAAAIRRVEGGDAVFSPRLAGFVLDAFHGDLTGVVDPELDQLTAREREVLRHIARGFTYKEVARRLHLSVKTVETHVSSVLRKLQLSSRHELTRWASDRRLV*