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PLM3_60_coex_sep16_scaffold_489_15

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(13910..15154)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C951D similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 414.0
  • Bit_score: 671
  • Evalue 4.10e-190
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EMD29718.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 410.0
  • Bit_score: 612
  • Evalue 3.10e-172
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 412.0
  • Bit_score: 606
  • Evalue 3.50e-171

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTGCCCGAGGCCGAGGTCGAGGGCCTGCTGCGCGGGTTGGCGCCGCTGGCCCTCGGTGCGCTGGTACGCCGTTATGGGCACTTCGACACCGCCGAGGACGCCGTGCAAGAGGCGCTCCTCGCGGCCGCCGTGCAGTGGCCGAAGGATGGCATCCCGGACAATCCGCGAGCTTGGCTGATCACGGTCGCCTCGCGCAGGCTGACCGACCTGCTGCGCAGCGAGCAGGCGCGCCAACGCCGTGAGGACACCGTCGCCACGTGGACACTGCCCGACCAGTGGCTGGCGCCCGCCGCCGACCGGCCGCCATCGGAGTCTGACGACACGCTCATCCTGCTGTTCATGTGTTGTCATCCCGCGCTGTCGCCGGCGTCGCAGATCGCGCTGACCTTGCGGGCGGTCGGCGGCTTGACCACCGCGGAGATCGCCCGGGCGTTCCTGGTGCCGGAGGCGACCATGACCCGACGCATCAGCCGGGCCAAGCAGCGCATCAAGGACAGCGGCATGCCCTTCGGCATGCCCCCGGGCGCCGAGCGCACCCAACGGCTCGGCGCGGTTCTCCACGTGCTCTACCTGATCTTCAACGAGGGCTACGCCAGCACGTCAGGGCCGAGCCTGCACCGCGGCGAGCTGTCGGCCGAAGCGATCCGGCTGGCCCGCATGGTCCACCGCCTGCTGCCCGACGATGGCGAGGTGACAGGGCTGCTTGCGCTCATGCTGCTCACCGACGCGCGCCGGCCGGCGCGAACCGGACCGGACGGCGGGTTGATCCCGATGGCCGAGCAGGACCGAAGCCGCTGGAACGTCGGCGACATCGCCGAGGGCGTGGCGCTCATCACCGACGCGCTTCCTCGGGGGGCAACCGGCCCGTACCAGCTCCAGGCGGCGATCGCCGCGATCCACGACGAGGCGCCGAGCGCCGAGGCGACCGACTGGCCGCAGATCATGGCGCTGTACGAGCTGCTGCTGCGGATCGCCGACAACCCTGTGGTGGCGCTGAACCACGCCGTCGCGGTCGCCATGGTCCGAGGCCCGCACACGGGGCTCGACCTGCTCGGAAAGCTCGAGGCCGACGAGCGGATCGCCGGGGACCACCGCCTCCACGCGGTCCGCGCGCACCTGCTGGAGATGGCCGGCGATCGCGTGGCGGCGCGCGACGCCTACCAGGCGGCGGCCCGGCGGACAACCAGCCTCCCGCAACAGCGCTACCTCCACGCTCGCGCCGCCCGCCTCACCGACGACCAGTGA
PROTEIN sequence
Length: 415
VPEAEVEGLLRGLAPLALGALVRRYGHFDTAEDAVQEALLAAAVQWPKDGIPDNPRAWLITVASRRLTDLLRSEQARQRREDTVATWTLPDQWLAPAADRPPSESDDTLILLFMCCHPALSPASQIALTLRAVGGLTTAEIARAFLVPEATMTRRISRAKQRIKDSGMPFGMPPGAERTQRLGAVLHVLYLIFNEGYASTSGPSLHRGELSAEAIRLARMVHRLLPDDGEVTGLLALMLLTDARRPARTGPDGGLIPMAEQDRSRWNVGDIAEGVALITDALPRGATGPYQLQAAIAAIHDEAPSAEATDWPQIMALYELLLRIADNPVVALNHAVAVAMVRGPHTGLDLLGKLEADERIAGDHRLHAVRAHLLEMAGDRVAARDAYQAAARRTTSLPQQRYLHARAARLTDDQ*