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PLM3_60_coex_sep16_scaffold_489_23

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(23710..24423)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardiopsis valliformis RepID=UPI00036AE073 similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 235.0
  • Bit_score: 194
  • Evalue 8.30e-47
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 232.0
  • Bit_score: 169
  • Evalue 6.20e-40
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA29058.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 232.0
  • Bit_score: 169
  • Evalue 3.10e-39

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCCGGGCTTCACGCAGTCCAAGGTGTCACGGCTCGAAACCGGCCGGACGACTCCGAGCTTGGCGGATATCGAGGCGTGGACGCGGGCGACCAACGCCAGTGCCGAGGAGATCACCGATCTGGCCGGCCTGGTCGAGCAGCTGGCAACATCGGCGACGAGTTGGCGGATTCTCCACCGGCTCGGACTGGCTGAGAAACAGCGTGAGATTGCCGAGCTCGAGCGGGAGGCCCGTCACGTCCGTACGTTTCAGCCGACGATGATACCGGGCCTGTTGCAGGTGGCCGACTACGCCCGCCGGGTCATCGAAATGGCGTACCGGCCAGGAGACATCGCCCCGGCCGTAGCTGCCCGCATGGAGCGGCAGAGCATTCTCTACGACCAAACCAGACGGTTCGACTTCCTCGTTACCGAGGGCGCGTTACGCTGGCGGCCGGGCGACATGGATATGCGCCCACAACTCGACCGCCTTCTCTCCATTGCTTCCTTGCCAAACGTGGCATTGTCTGTCGTGCCGTACGGTCCCGGCCGGATGCCGCTGCTTCATCCCTTCGTCATGTGGGAGCTTGAAGGCGAAACCCTGATCACCGTTGAGACCTACAGCGCCGAGCTACAGGTCCGCGATCCCGCCGATGTTCAGCGTTACCAGGAGGTCTGGACGCGGCTCACGGAGGGTGCCGTCGGGGGTGATAGGTGGATCAGGACGAGTGGGTGA
PROTEIN sequence
Length: 238
MPGFTQSKVSRLETGRTTPSLADIEAWTRATNASAEEITDLAGLVEQLATSATSWRILHRLGLAEKQREIAELEREARHVRTFQPTMIPGLLQVADYARRVIEMAYRPGDIAPAVAARMERQSILYDQTRRFDFLVTEGALRWRPGDMDMRPQLDRLLSIASLPNVALSVVPYGPGRMPLLHPFVMWELEGETLITVETYSAELQVRDPADVQRYQEVWTRLTEGAVGGDRWIRTSG*