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PLM3_60_coex_sep16_scaffold_678_18

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(13531..15594)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 704.0
  • Bit_score: 604
  • Evalue 1.90e-169
Transcription termination factor Rho Tax=Streptomyces sp. HPH0547 RepID=S3B1M7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 692.0
  • Bit_score: 592
  • Evalue 4.00e-166
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 691.0
  • Bit_score: 587
  • Evalue 4.70e-165

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Taxonomy

Tetrasphaera jenkinsii → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2064
ATGGCAACCACCGAACGCGACATCCTCGAAGCGAAGGTCCTGCCCGAGTTGCAGGCGATCGCCTCGTCCATGGGTGTCCAGGGCTACCAGCGGCTCCGCAAGGCCGACCTGATCGGCGCGATCATCGCCAAGGCCCAGGGTGTCGAGTTCGTGCCTTCCTCCGGCTCCTCGGGTCGGGGCCGGCGCGGCGGCGCGGCCGCCACCGGCGACGCCCAGGCGGCCAACCAGCAGGAGCTGCCCGGCACCGCCGAGGAGCCCAGCGCGCCGGCGGAGCAGAAGGCCCAGGTGGACGCGGCCGGCAACGGCAGCCAGCCGGCGTCCGCCGAGGCCGGTCCTCGCCTGGCGGAGCGTGAAGCCGACCCTCGCCCGGCGGAGGGCGAGGCCCGCAACGGCGAGCGCGCCGACGGGCGGCAGCCCGCCGCCGCTCCCGCGGAGCCCGCGGCCGAGGGCGGCCAGCGGGCGCAGGAGCAGGTGCAGGTGGCCGCGGAGGTCCAGCCGGCACAGGCCGAGTCCAACCCGGGCGGCGGCCAGGCGGCCGGTTCCGAGGGCCAGCCCGCCACCGGGCAGGCCCAGCCGGCCGACGCCGGGCAGACCCAGGCGGGCGACGCCGGCCAGGCCTCCGGTGGCCAGCAGGGCCAGGGGCAGGGCGGCCGCCAGGGTGACGGCCGCGGCGACGGACAGCCGGAGGGGTCCGGGGAACCCCGAGGGGGTGCCCCGGTGGGTCAGGACCACGGCGGCGACCGCGGCCAGCGCCGCGACCGCGACTGGGGCGGCCAACAGGGCAACCGCTGGGAGAACCAGCAGGGCCAGGGCGGCGGTAGCAGCCGGCGCCGCAACCGCAACCGCAACCGGAACCGCAACCGCGGCTTCAACGAGCAGGGCGGCGGCAACGTCGCGCTGCTCGACCGGCCCGACTACCGCGACCGGCAGCAGCCCGACGACCGTCCGGAGGTCAGCCGCACCGGCACCCTCGACATCCGCGCCCAGGACGGCTACGGCTTCCTGCGGGTCAACGGCTACCTGCCGGGCCAGGAGGACGTGTACGTGCCGCTGTCCATGATCCGGAGGATGGGGCTGCGCCGCGGGGACGAGATCGAGGGCACGGTCAAGCTGCCGCGCGACTCCGAGAAGTACGCCGCGCTCTCCCGGGTCGACAAGGTCAACGGCCTGGACCCGGAGGAGGCCCGCACCCGCCGCGACTTCAAGGACCTGACCCCGCTCTACCCCGCGGAGCGGCTGCGCCTTGAGAACAACCCGACCGAGATCTCCACGCGGATCATGGACCTGATGTGCCCGATCGGGAAGGGCCAGCGCGGGCTGATCGTCTCGCCGCCCAAGGCGGGCAAGACCACCCTGATGAAGCAGATCGCCAACGCGATCAGCGCCAACAACCCCGAGGTGTACCTCATCATCCTGCTCACCGGCGAGCGGCCCGAAGAGGTCACCGACATGCAGCGCTCGACCAAGGCGCACGTGATCTACTCGACCTTCGACCGGCCGAGCGAGGAGCACTGCCAGGTCGCCGAGCTGACCATCGAGCGGGCCAAGCGGCTGGTCGAGTACGGCCGCGACGTGGTGGTGCTGCTGGACGGCATCACCCGCCTGTCGAGGGCCTACAACCTGGCCACGCCCGCCAGCGGCAAGATCCTCTCCGGTGGGGTCGACTCCTCGGCCCTGTACCCGCCCAAGCGGTTCTTCGGCGCGGCCCGCAACCTGGAGGAGGGTGGCTCGCTGACGATCCTGGCCACCGCCCTGGTCGACACCGGCTCGCGGATGGACGAGGTGATCTTCGAGGAGTTCAAGGGCACCGGGAACATGGAGGTCCGCCTGGACCGCAAGCTGTCCGAGCGGCGGATCTTCCCGGCCCTGGACGTCGACGCCTCCTCGACCCGCAAGGAGGAGCTGCTGCTCACCGAGGAGGAGCTGGTCGTCGCCTGGAAGCTGCGCCGGGTGCTCGGCGCGCTCGAGCCGGCCCAGGCCCTGGAGCTGGTGGTCGACCGGATGCGACAGAGTAAGACCAACGCCGAGTTCCTGCGGCACATCCAGCGGGCCAACATCAGCTAG
PROTEIN sequence
Length: 688
MATTERDILEAKVLPELQAIASSMGVQGYQRLRKADLIGAIIAKAQGVEFVPSSGSSGRGRRGGAAATGDAQAANQQELPGTAEEPSAPAEQKAQVDAAGNGSQPASAEAGPRLAEREADPRPAEGEARNGERADGRQPAAAPAEPAAEGGQRAQEQVQVAAEVQPAQAESNPGGGQAAGSEGQPATGQAQPADAGQTQAGDAGQASGGQQGQGQGGRQGDGRGDGQPEGSGEPRGGAPVGQDHGGDRGQRRDRDWGGQQGNRWENQQGQGGGSSRRRNRNRNRNRNRGFNEQGGGNVALLDRPDYRDRQQPDDRPEVSRTGTLDIRAQDGYGFLRVNGYLPGQEDVYVPLSMIRRMGLRRGDEIEGTVKLPRDSEKYAALSRVDKVNGLDPEEARTRRDFKDLTPLYPAERLRLENNPTEISTRIMDLMCPIGKGQRGLIVSPPKAGKTTLMKQIANAISANNPEVYLIILLTGERPEEVTDMQRSTKAHVIYSTFDRPSEEHCQVAELTIERAKRLVEYGRDVVVLLDGITRLSRAYNLATPASGKILSGGVDSSALYPPKRFFGAARNLEEGGSLTILATALVDTGSRMDEVIFEEFKGTGNMEVRLDRKLSERRIFPALDVDASSTRKEELLLTEEELVVAWKLRRVLGALEPAQALELVVDRMRQSKTNAEFLRHIQRANIS*