ggKbase home page

PLM3_60_coex_sep16_scaffold_1047_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2..370)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC11 {ECO:0000255|HAMAP-Rule:MF_00265}; Short=RNase VapC11 {ECO:0000255|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00265};; Toxin VapC11 {ECO:0000255|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 1.30e-25
Ribonuclease VapC Tax=Mycobacterium canettii RepID=G0TJE4_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 9.40e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 2.60e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium tuberculosis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGACCGTCCTGGCCGACACCTCGGCCTGGGTCGAGTACCTCCGTGGCACCGGGAGCCCCGCCCACTTGCAGCTTCGCCGCCTGATCGCCGACGAGGTCGCGGTGGTCACCACCGAGGTGGTGGTGATGGAGCTGCTCGCCGGCGCGTCCGACGACGAGGAGCTGGCGCGGCTGAGCCGGCTGCTCGGTCGCTTCGAGCTCCTCCCGGTCGAGGGGCTCGCCGACTACGAGGCCGCCGCCGAGCTGTACCGCCGCTGCCGGCGCGCCGGCGAGACCGTCCGCAAGCTCACCGACTGCCTGATCGCCGTCGTCGCCATCCGGGCCGGTGCCGCGCTCCTCCACCGCGACCAGAACTTCGAGGTGATCGCC
PROTEIN sequence
Length: 123
VTVLADTSAWVEYLRGTGSPAHLQLRRLIADEVAVVTTEVVVMELLAGASDDEELARLSRLLGRFELLPVEGLADYEAAAELYRRCRRAGETVRKLTDCLIAVVAIRAGAALLHRDQNFEVIA