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PLM3_60_coex_sep16_scaffold_1047

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1047_1
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..370)
DNA (369bp) protein (123aa)
Ribonuclease VapC11 {ECO:0000255|HAMAP-Rule:MF_00265}; Short=RNase VapC11 {ECO:0000255|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00265};; Toxin VapC11 {ECO:0000255|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh).;"
Ribonuclease VapC Tax=Mycobacterium canettii RepID=G0TJE4_MYCCP
hypothetical protein
PLM3_60_coex_sep16_scaffold_1047_2
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(367..579)
DNA (213bp) protein (71aa)
Antitoxin VapB11 Tax=Mycobacterium tuberculosis complex RepID=VPB11_MYCTU
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_1047_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(626..2098)
DNA (1473bp) protein (491aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N Tax=Ilumatobacter coccineus YM16-304 RepID=M5A608_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1047_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2112..3653)
DNA (1542bp) protein (514aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit 4 (Chain M) Tax=Candidatus Actinomarina minuta RepID=S5DLF0_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1047_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(3676..5574)
DNA (1899bp) protein (633aa)
nuoL; proton-translocating NAD(P)H-quinone oxidoreductase, chain L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3_60_coex_sep16_scaffold_1047_6
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5585..5890)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K Tax=Candidatus Actinomarina minuta RepID=S5DLC9_9ACTN
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)-like protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_1047_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(5901..6395)
DNA (495bp) protein (165aa)
Putative NADH-ubiquinone oxidoreductase protein, chain J Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4K7_STRRD
NADH-ubiquinone oxidoreductase protein, chain J
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1047_8
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6392..7477)
DNA (1086bp) protein (362aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI0003687B4F
formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)-like protein
PLM3_60_coex_sep16_scaffold_1047_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7477..8457)
DNA (981bp) protein (327aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH dehydrogenase Tax=Salinispora arenicola RepID=UPI00036FA4F9
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1047_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8454..9641)
DNA (1188bp) protein (396aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
NADH dehydrogenase I subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D Tax=Actinoplanes globisporus RepID=UPI000378FE94
PLM3_60_coex_sep16_scaffold_1047_11
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9646..10119)
DNA (474bp) protein (158aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MUE1_9ACTO
NADH dehydrogenase (ubiquinone) 30 kDa subunit
PLM3_60_coex_sep16_scaffold_1047_12
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10134..10649)
DNA (516bp) protein (172aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
NADH-quinone oxidoreductase subunit B Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3L8_THEBD
PLM3_60_coex_sep16_scaffold_1047_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10640..11005)
DNA (366bp) protein (122aa)
NADH-quinone oxidoreductase subunit Tax=Streptomyces bottropensis ATCC 25435 RepID=M3F0E7_9ACTO
NADH dehydrogenase subunit NuoA2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1047_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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11143..12738
DNA (1596bp) protein (532aa)
Diguanylate cyclase/phosphodiesterase bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
diguanylate cyclase/phosphodiesterase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1047_15
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12735..13391)
DNA (657bp) protein (219aa)
Transporter subunit: ATP-binding component of ABC superfamily Tax=Modestobacter marinus (strain BC501) RepID=I4ESD8_MODMB
ABC transporter ATP-binding protein
Transporter subunit: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCH86301.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_1047_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13388..14206)
DNA (819bp) protein (273aa)
ABC transporter related protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S3U0_GEOOG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB72968.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_1047_17
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14196..15755)
DNA (1560bp) protein (520aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4ESD7_MODMB
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCH86300.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Displaying 17 items

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