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PLM3_60_coex_sep16_scaffold_1334_13

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 16191..16955

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003674707 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 257.0
  • Bit_score: 225
  • Evalue 4.70e-56
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 256.0
  • Bit_score: 209
  • Evalue 7.60e-52
Putative DNA-binding protein {ECO:0000313|EMBL:CAJ64135.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 256.0
  • Bit_score: 209
  • Evalue 3.80e-51

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Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGACTGGTCGCTGTCGAAACTGACCCGCATCGAGTCTGGGAGGGTCGGAATCTCCACCAACGACCTCAGGGCTCTGCTGCACCACTACGGCGTCAACGATGCTGCCGAGGTTGATCGCTTCATCAAGATGGCCCGAACCAGCAAGACAGAACGGGCGTGGTGGACTGGTTACAGGGAAGCCATCTCCCCGCAGTTCTTGTCATTCCTGAGCTACGAGAACTCGGCTTCGGCCATCTATCACTTCGAGCCGATGGTGGTTCCCGGGCTCCTGCAAGAGGAAGAGTACGCCCGCGCCGTCCTCCAGGCACTCAGCGGATCCGCTACCAGCAAGCGGGTGGAAGAATTGGTTGAGCTGCGCATGAAGCGGCAGGAGGAGCTGTTGTACCGGCAAGACCCACCGGAAATGCTCTTCATCATGGATGAAGCCGCCTTGCATCGCTGGATAGGGGGGCGTGATGTGATGCGTCACCAGCTCCTCCATCTAAGGGAGATTGCCGCCGAGCAGAGCAAGGTAACGATCGAGGTCGTACCCTTCACTGCCGGCGCCCACCCCGGCATGAAAGGGCCATTCGTCATCTTGGAATTCGCCGATGACGTCGATGAGGACGTCCTATTCTTGGAGGACTTCCGTGGCGACGTGATCAGCCGTGACGAGCGAGAAGAGATCGACCCCGCCCGCGAAGCTCTCGGCAGCCTGCGAGACCTGGCCCGGAAAGAGAATATCGAATCTGCAATCGATAGAACGCTAAAAGAAATGTCGTAG
PROTEIN sequence
Length: 255
MDWSLSKLTRIESGRVGISTNDLRALLHHYGVNDAAEVDRFIKMARTSKTERAWWTGYREAISPQFLSFLSYENSASAIYHFEPMVVPGLLQEEEYARAVLQALSGSATSKRVEELVELRMKRQEELLYRQDPPEMLFIMDEAALHRWIGGRDVMRHQLLHLREIAAEQSKVTIEVVPFTAGAHPGMKGPFVILEFADDVDEDVLFLEDFRGDVISRDEREEIDPAREALGSLRDLARKENIESAIDRTLKEMS*