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PLM3_60_coex_sep16_scaffold_1334

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1334_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..847)
DNA (846bp) protein (282aa)
Glycosyl transferase family 2 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYP7_FRADG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH08554.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_1334_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(807..2036)
DNA (1230bp) protein (410aa)
Teichoic-acid-transporting ATPase Tax=Frankia sp. CN3 RepID=G6HL34_9ACTO
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADP84075.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_1334_3
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2036..2914)
DNA (879bp) protein (293aa)
ABC-2 type transporter Tax=Frankia sp. (strain EAN1pec) RepID=A8L9U7_FRASN
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM3_60_coex_sep16_scaffold_1334_4
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2924..4465)
DNA (1542bp) protein (514aa)
Putative Glycosyl transferase Tax=Frankia alni (strain ACN14a) RepID=Q0RRC3_FRAAA
glycosyl transferase
Putative Glycosyl transferase {ECO:0000313|EMBL:CAJ59897.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_1334_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(4497..5339)
DNA (843bp) protein (281aa)
Methyltransferase type 11 Tax=uncultured bacterium A1Q1_fos_2004 RepID=L7VY11_9BACT
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_coex_sep16_scaffold_1334_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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5494..6525
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI0003746626
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ACY97382.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_1334_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(6695..8254)
DNA (1560bp) protein (520aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA94_SPHTD
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACZ40737.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_1334_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(8565..10847)
DNA (2283bp) protein (761aa)
N-acetylmuramoyl-L-alanine amidase, family 2 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY1_ACIC1
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:ABK52191.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_1334_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10895..12199)
DNA (1305bp) protein (435aa)
SpoIID/LytB domain protein Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A184_CELGA
SpoIID/LytB domain protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:AEI11631.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
PLM3_60_coex_sep16_scaffold_1334_10
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12308..13180)
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI0003817F69
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EXX86049.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
PLM3_60_coex_sep16_scaffold_1334_11
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(13185..14234)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dTDP-glucose 4,6-dehydratase
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_60_coex_sep16_scaffold_1334_12
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14266..15534)
DNA (1269bp) protein (423aa)
Putative transcriptional regulator Tax=Streptomyces sp. Tu6071 RepID=F3ZET8_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:EGJ75260.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
cell envelope-related transcriptional attenuator
PLM3_60_coex_sep16_scaffold_1334_13
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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16191..16955
DNA (765bp) protein (255aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003674707
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:CAJ64135.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_1334_14
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17687..17896)
DNA (210bp) protein (70aa)
Putative regulatory protein (Partial) Tax=Frankia alni (strain ACN14a) RepID=Q0REH6_FRAAA
regulatory protein
Putative regulatory protein (Partial) {ECO:0000313|EMBL:CAJ64134.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_1334_15
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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18572..19864
DNA (1293bp) protein (431aa)
transposase IS605 Tax=Actinomadura atramentaria RepID=UPI0003637E84
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EKX63779.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Putative transposase in snaA-snaB intergenic region
PLM3_60_coex_sep16_scaffold_1334_16
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19861..20865
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000360621F
TIGR03089 family protein {ECO:0000313|EMBL:EIV93999.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1334_17
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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20959..22041
DNA (1083bp) protein (361aa)
glycosyl transferase family protein bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
dolichyl-phosphate mannose synthase-like protein
Tax=RBG_16_Aminicenantes_63_16_curated
Displaying 17 items

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