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PLM3_60_coex_sep16_scaffold_1408_10

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 5566..6498

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 307.0
  • Bit_score: 405
  • Evalue 5.70e-110
DNA-directed RNA polymerase subunit alpha Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y545_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 307.0
  • Bit_score: 405
  • Evalue 4.10e-110
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 307.0
  • Bit_score: 405
  • Evalue 1.10e-110

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGAGATCTCGCGTCCACGCATCGAGTCCAACCCGCTCTCCGACACCCGCTCACGCTTCGTCATCGAGCCGCTCGAACCGGGCTTCGGCTACACACTCGGCAACTCCCTGCGCCGGACGCTGCTGTCCTCCATCCCGGGGGCGGCGGTCACGTCCATCAAGATCGACGGCGTCCTGCACGAGTTCTCGTCCATCCAGGGCGTCAAGGAGGACGTCACCGACGTCATCCTGAACATCAAGGAGCTGCGCCTGCGCTCGGAGACCACTGAGCCGGCGACCATGTTCCTGCGCGCCACCGGCCCCGGCGAGGTGACGGCCGCCGACATCGTGCCCCCGGCCGACATCGACGTCATCAACCCGGAGCTGCACCTGGCCACCCTGAACACCAAGGCGAAGCTCGAGATGGAGCTGCGGGTCGAGAAGGGCCGCGGCTACCGGCCGGCCGAGCGCAACAAGTCCGCCTCCGACGAGATCGGCCGCGTCCCCATCGACTCGATCTTCTCGCCGGTGCGGCGGGTCAGCTACACCGTCGAGGCCACCCGCTCGGGTGAGATGACCAACTACGACCGGCTGATCCTCGACGTCGAGACCGACGGCTCGCTGTCGCCGGAGGACGCGCTCGCCTCGGCGGGCGGCACCCTGCGCGAGCTGGTCAGCCTGTTCGCGGACCTGACCGGTGGCGGCGAGGGGCTGTCGCTCGGCCCGGCGGAGCAGGTCGGGCCGCTCGGCGCCAACCTGGACACGCCGATCGAGGAGCTGGACCTGTCGGTGCGCTCCTACAACTGCCTCAAGCGCGAGGGCATCACCACGGTCGGCGAGCTGGTCACCAAGTCCGAGGCCGACCTGCTGGACATCCGCAACTTCGGCGCGAAGTCCATCGACGAGGTGCGCGAGAAGCTGCACGAGCTCGGCCTGTCGCTGAGGGAGGAGTAA
PROTEIN sequence
Length: 311
MEISRPRIESNPLSDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFSSIQGVKEDVTDVILNIKELRLRSETTEPATMFLRATGPGEVTAADIVPPADIDVINPELHLATLNTKAKLEMELRVEKGRGYRPAERNKSASDEIGRVPIDSIFSPVRRVSYTVEATRSGEMTNYDRLILDVETDGSLSPEDALASAGGTLRELVSLFADLTGGGEGLSLGPAEQVGPLGANLDTPIEELDLSVRSYNCLKREGITTVGELVTKSEADLLDIRNFGAKSIDEVREKLHELGLSLREE*