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PLM3_60_coex_sep16_scaffold_1063_15

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(14978..15478)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6H3B5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 166.0
  • Bit_score: 197
  • Evalue 6.90e-48
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 186
  • Evalue 4.50e-45
Integrase catalytic region {ECO:0000313|EMBL:ABW12451.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 186
  • Evalue 2.20e-44

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGCTGTTCGTCATCGAGCTCGGCAGCCGGCGGGTCCACCTCGCTGGCGTCACCAATCATCCCACCGGCCTTTGGGTTACCCAGCAGGCCCGCAACCTCCTACTGGCGCTGGGCGAGCGGGGCCCACGGGTGCACTTCGTTATTCGTGACCGTGACGCGAAGTTCTGTCGCGGGTTCGACGACGTGTTCGGCTCCGAGGGTGCCGAGGTGCTCCGAACGCCGCTGGAGGCACCCAACGCAAACGCCTACGCGGAACGGTGGGTCGGCACCGTTCGCGCCGAGTGTCTGGACTGGTTACTGGTCGTGGGCCGAGGGCACCTGGAGCGGACCCTCAAGGTGTACATCGCGCACTACAACGCTCATCGCCCCCACCGGGCGCTGCAACTTGAGCCGCCGGATCCAGCCGCTGCTGTAACCCTCATCAGCGGCCACCCGCCAGCCCGGGTACACCGACGCGACCTGCTCGGCGGTCTCCTGCACGAGTACCGACGAGCTGCATGA
PROTEIN sequence
Length: 167
VLFVIELGSRRVHLAGVTNHPTGLWVTQQARNLLLALGERGPRVHFVIRDRDAKFCRGFDDVFGSEGAEVLRTPLEAPNANAYAERWVGTVRAECLDWLLVVGRGHLERTLKVYIAHYNAHRPHRALQLEPPDPAAAVTLISGHPPARVHRRDLLGGLLHEYRRAA*