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PLM3_60_coex_sep16_scaffold_2359_11

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(10428..10775)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 114.0
  • Bit_score: 64
  • Evalue 6.80e-08
thiouridylase Tax=Nocardiopsis chromatogenes RepID=UPI00037CCEF3 similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 112.0
  • Bit_score: 66
  • Evalue 1.70e-08
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 105.0
  • Bit_score: 63
  • Evalue 4.00e-08

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Taxonomy

Streptomonospora alba → Streptomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGACAGGTGCTCGGTGGGGGAGCGGGCCGAGCTGGCCATCCGGGCGGTCGAGCTGGAGCGGGCTTCCGGCACCGACGGGCGCGGGCTCCGGCCCGGCCACGCCAGGGTGCGCCTGCGCGCCCACGGCCAGGAGGCCGGCTGCCAGGTGGTCCCCCTCGGCCCGGAGGGGTCCGGGGAACCCCGGAGGGGTGCCCCGGTGAACAGGGGCCGGACCCGCCTCGACCTCGACGAGCCGGTCGCCGCCGTCGCCCCCGGCCAGGCGGCCGTGCTCTACGACGGCGACCTGGTCCTCGGCGGCGGCACGGTGGCCGCCACCGTGCCCGCCACCTCCTCACCGGCCGGGTAG
PROTEIN sequence
Length: 116
MDRCSVGERAELAIRAVELERASGTDGRGLRPGHARVRLRAHGQEAGCQVVPLGPEGSGEPRRGAPVNRGRTRLDLDEPVAAVAPGQAAVLYDGDLVLGGGTVAATVPATSSPAG*