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PLM3_60_coex_sep16_scaffold_2359

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2359_1
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Streptomyces albulus CCRC 11814 RepID=S0GZG9_STRA9
Sugar ABC transporter permease {ECO:0000313|EMBL:EXU91091.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
putative sugar ABC transporter permease protein
PLM3_60_coex_sep16_scaffold_2359_2
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(438..1742)
DNA (1305bp) protein (435aa)
Extracellular solute-binding protein family 1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGQ4_ACTMD
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACU34370.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM3_60_coex_sep16_scaffold_2359_3
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1779..3002)
DNA (1224bp) protein (408aa)
N-acetylglucosamine-6-phosphate deacetylase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EDJ2_THECK
N-acetylglucosamine-6-phosphate deacetylase
Tax=GWB2_Chloroflexi_54_36_curated
PLM3_60_coex_sep16_scaffold_2359_4

Not on your lists

comp(3011..3751)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=uncultured bacterium 8 RepID=H9CXY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFD03087.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 8.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2359_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3853..4614
DNA (762bp) protein (254aa)
Transcriptional regulator, GntR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0V8_CONWI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB54042.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_2359_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4814..6010)
DNA (1197bp) protein (399aa)
ABC transporter related Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7V7_NAKMY
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV80960.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_60_coex_sep16_scaffold_2359_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6037..7881)
DNA (1845bp) protein (615aa)
Alpha amylase catalytic region Tax=Micromonospora sp. (strain L5) RepID=E8RZB3_MICSL
alpha amylase catalytic subunit
Alpha amylase catalytic region {ECO:0000313|EMBL:ADL44336.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_60_coex_sep16_scaffold_2359_8
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7884..8780)
DNA (897bp) protein (299aa)
sugar ABC transporter permease Tax=Micromonospora sp. CNB394 RepID=UPI00037233EB
Maltose ABC transporter permease {ECO:0000313|EMBL:EWM66052.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
binding-protein-dependent transport systems inner membrane component
PLM3_60_coex_sep16_scaffold_2359_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8825..9748)
DNA (924bp) protein (308aa)
malF; maltose/maltodextrin transport system permease (EC:4.1.2.13)
Multiple sugar transport system permease Tax=Micromonospora sp. ATCC 39149 RepID=C4RP02_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65055.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM3_60_coex_sep16_scaffold_2359_10
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10300..10503
DNA (204bp) protein (68aa)
Maltose operon transcriptional repressor Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3CE20_STRMB
Maltose operon transcriptional repressor {ECO:0000313|EMBL:EMF02256.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
LacI family transcriptional regulator
PLM3_60_coex_sep16_scaffold_2359_11
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10428..10775)
DNA (348bp) protein (116aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
thiouridylase Tax=Nocardiopsis chromatogenes RepID=UPI00037CCEF3
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
PLM3_60_coex_sep16_scaffold_2359_12
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11436..12617)
DNA (1182bp) protein (394aa)
cysteine desulfurase (EC:2.8.1.7)
cysteine desulfarase Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000382735B
SPG23_c21, whole genome shotgun sequence {ECO:0000313|EMBL:KIS26902.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
PLM3_60_coex_sep16_scaffold_2359_13
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(12631..15828)
DNA (3198bp) protein (1066aa)
penicillin-binding protein (EC:2.4.1.129) bin=bin9_gal15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
penicillin-binding protein 1A (EC:2.4.1.129)
Tax=GWC2_SYX_53_9_curated
PLM3_60_coex_sep16_scaffold_2359_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15828..16781)
DNA (954bp) protein (318aa)
Electron transfer flavoprotein alpha subunit Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7D5_CATAD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACU70223.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_2359_15
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16797..17582)
DNA (786bp) protein (262aa)
electron transfer flavoprotein subunit beta Tax=Longispora albida RepID=UPI00035F9D75
electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:AAZ54631.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_60_coex_sep16_scaffold_2359_16
unknown

Not on your lists

17592..18746
DNA (1155bp) protein (385aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2359_17
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18917..19918
DNA (1002bp) protein (334aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ABC20233.1}; EC=2.7.7.12 {ECO:0000313|EMBL:ABC20233.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Galactose-1-phosphate uridylyltransferase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH56_MOOTA
PLM3_60_coex_sep16_scaffold_2359_18
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19915..20700)
DNA (786bp) protein (262aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:AAZ54628.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AAZ54628.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
enoyl-CoA hydratase Tax=Nocardiopsis gilva RepID=UPI0003455DD4
PLM3_60_coex_sep16_scaffold_2359_19
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

20875..21171
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=Streptomyces sp. Mg1 RepID=B4UZ01_9ACTO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_60_coex_sep16_scaffold_2359_20
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21202..22869)
DNA (1668bp) protein (556aa)
yliK; methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RXA9_BLASD
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KGH44641.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM3_60_coex_sep16_scaffold_2359_21
unknown

Not on your lists

comp(23173..24015)
DNA (843bp) protein (281aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2359_22
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24084..24797
DNA (714bp) protein (238aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C76D2C
LysM domain-containing protein 2
LysM domain protein 2 {ECO:0000313|EMBL:ADP15561.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
PLM3_60_coex_sep16_scaffold_2359_23
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24794..25264)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRC5_MICPN
integrin-like protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34615.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2359_24
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25585..25956
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2NR90_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD24834.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2359_25
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25953..26909)
DNA (957bp) protein (319aa)
putative GTPase (EC:3.6.-.-)
Putative GTPase {ECO:0000313|EMBL:CCH34540.1}; EC=3.6.-.- {ECO:0000313|EMBL:CCH34540.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Putative GTPase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K2R8_SACES
PLM3_60_coex_sep16_scaffold_2359_26
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(26947..28137)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035D3214
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_60_coex_sep16_scaffold_2359_27
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28732..29679
DNA (948bp) protein (316aa)
transposase IS605 Tax=Catelliglobosispora koreensis RepID=UPI000365CF33
transposase
Transposase {ECO:0000313|EMBL:ABD12784.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_60_coex_sep16_scaffold_2359_28
unknown

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29676..30419
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2359_29
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

30443..30865
DNA (423bp) protein (141aa)
methylmalonyl-CoA epimerase Tax=Nocardiopsis kunsanensis RepID=UPI00034BD702
methylmalonyl-CoA epimerase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2359_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30990..31838)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003715DAB
Alpha/beta hydrolase {ECO:0000313|EMBL:ETK33842.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hydrolase
Displaying items 1-30 of 44 in total

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