ggKbase home page

PLM3_60_coex_sep16_scaffold_8049_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1170..2609)

Top 3 Functional Annotations

Value Algorithm Source
cysteinyl-tRNA synthetase (EC:6.1.1.16) similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 488.0
  • Bit_score: 462
  • Evalue 9.40e-128
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 488.0
  • Bit_score: 462
  • Evalue 4.60e-127
Cysteine--tRNA ligase Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RNB3_ALLVD similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 488.0
  • Bit_score: 462
  • Evalue 3.30e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Allochromatium vinosum → Allochromatium → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
GTGAACCTGCAGCTCTCCAACACGCTCACCCGGCGCAAGGAGCCGTTCGTCCCTCGTGACGAGGGCCGGGTCGGCATCTACCTGTGCGGGCCGACGGTCTACGGCGAGACGCACATCGGCAACCTCCGCAACGTGGTGGTGTTCGATGTGCTCCGGCGCCATCTGGTGGCCTCGGGGTACGAGGTGCTGTACGTCCGCAACCTCACCGACGTCGACGACAAGATCATCGCCGCCGCCGGCCACGACCCGCTGCGCGCGTTCGTCGTGGCCGAGCGCTGGGCCCGCGTGTACGACGAGATCACCGCCGCGCTCGGCGTGCTGCCGCCCGACATCGTCCCGAGGGCCAGCGGCCACGTTCCCGAGATGCTCGCCCTGATCGCCAGGCTGCTGGAGCACGGGCTCGCCTACCAGGCCGGCGGCGACGTGTTCTTCGCGGTCGGCAAGTGGCCCGACTACGGCAAGCTCTCCGGTCGGGACGTCGGCGAGCTGCGCGCCGGCGCCAGGGTCGAGGTCAACCCGGAGAAGCGGGACCCGCTCGACTTCGTGCTCTGGAAGGGCGCCAAGCCTGGCGAGCCCACCTGGGACTCGCCGTGGGGCCCCGGCCGTCCCGGCTGGCACATCGAGTGCTCCGCCATGGCCGCCAGGTACCTCGGCGCCGGCTTCGACATCCATGGCGGCGGCGAGGACCTGGTCTTCCCCCACCACGAGAACGAGATCGCGCAGTCCGAGGGCGCGACCGGCGAGCCGTTCGCGCGCTACTGGCTGCACAACGCGTTCCTGGAGGTCAAGGGCGAGAAGATGGCCAAGTCGGTGGGGAACGTGGTCAGCCCCCGCGAGCTGCTCCGCCGCTACCGCGGGGTGGTGCTCCGCTACGCCCTGCTCGGCGCCCACTACCGCAGTCCCCTGGAGTTCTCCAACGAGGCGCTGGACGACGCCGCCGCCAGCTACGAGCGCCTGGCCACCTTCGCCGTCAACGCCGCCCGCGCCCTCCCGCCATCCGAGGAGGACCCGGCGCCCCCGACGGCTCCGGCGCACGGCTTGGCCCTGGTCGGGGAGGGGGGATGGCGGGAGCGGTTCGTGGCCGCGCTCGACGACGACCTGAACGTGCCCGCCGCCCTGGCGGTCCTGTTCGACCTGGTGGCGGAGACCAACCCGCTGATCGGCAAGGCGGAGCGGGGCGACGCCGCCGCCGCTGGCAAGCTGCGGGAGCGGCTGGCGCTGTTCGGCGACCTGGCCGCCCGGCTCGGCTTCACGCCGCTGCTCGACCTGCCCGACCGGGCTGCCTTCCCCGCCGTGCTCGACCTGGTCCTGGATCTGCGCGAGCGGGCGCGGGCCGCCCGCGACTTCGCCGCCGCCGACATGGTCCGCGAGCGCCTGGCCGCGGCCGGCATCCGGGTCGAAGACCGGGTCGGGGGCCCCCGATGGCACCTCGCCCGCTAG
PROTEIN sequence
Length: 480
VNLQLSNTLTRRKEPFVPRDEGRVGIYLCGPTVYGETHIGNLRNVVVFDVLRRHLVASGYEVLYVRNLTDVDDKIIAAAGHDPLRAFVVAERWARVYDEITAALGVLPPDIVPRASGHVPEMLALIARLLEHGLAYQAGGDVFFAVGKWPDYGKLSGRDVGELRAGARVEVNPEKRDPLDFVLWKGAKPGEPTWDSPWGPGRPGWHIECSAMAARYLGAGFDIHGGGEDLVFPHHENEIAQSEGATGEPFARYWLHNAFLEVKGEKMAKSVGNVVSPRELLRRYRGVVLRYALLGAHYRSPLEFSNEALDDAAASYERLATFAVNAARALPPSEEDPAPPTAPAHGLALVGEGGWRERFVAALDDDLNVPAALAVLFDLVAETNPLIGKAERGDAAAAGKLRERLALFGDLAARLGFTPLLDLPDRAAFPAVLDLVLDLRERARAARDFAAADMVRERLAAAGIRVEDRVGGPRWHLAR*