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PLM3_5_b1_sep16_scaffold_1160

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_1160_1
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2..322
DNA (321bp) protein (107aa)
Amino acid permease-associated region Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLC0_PSEUX
Transporter {ECO:0000313|EMBL:KGH47188.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
amino acid permease
PLM3_5_b1_sep16_scaffold_1160_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

357..1379
DNA (1023bp) protein (341aa)
adoK; adenosine kinase (EC:2.7.1.20)
Adenosine kinase {ECO:0000313|EMBL:BAK37159.1}; EC=2.7.1.20 {ECO:0000313|EMBL:BAK37159.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Adenosine kinase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRU6_MICPN
PLM3_5_b1_sep16_scaffold_1160_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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1426..1743
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6U6_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00984.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_5_b1_sep16_scaffold_1160_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1709..2908
DNA (1200bp) protein (400aa)
iron-containing alcohol dehydrogenase (EC:1.1.1.-)
Putative iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:BAK33431.1}; EC=1.1.1.- {ECO:0000313|EMBL:BAK33431.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Putative iron-containing alcohol dehydrogenase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJA5_MICPN
PLM3_5_b1_sep16_scaffold_1160_5
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2992..3261)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VA23_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB93068.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1160_6
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3635..4702)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Ruania albidiflava RepID=UPI0003B709A0
Uncharacterized protein {ECO:0000313|EMBL:EID16663.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1160_7
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4833..5606
DNA (774bp) protein (258aa)
Putative acetyltransferase, GnaT family Tax=Frankia alni (strain ACN14a) RepID=Q0RT90_FRAAA
GNAT family acetyltransferase
Putative acetyltransferase, GnaT family {ECO:0000313|EMBL:CAJ59211.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_5_b1_sep16_scaffold_1160_8
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5593..7254)
DNA (1662bp) protein (554aa)
MOSC domain protein Tax=Rhodococcus sp. JVH1 RepID=J1RC09_9NOCA
MOSC domain protein {ECO:0000313|EMBL:EJI95716.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
oxidoreductase
PLM3_5_b1_sep16_scaffold_1160_9
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7232..7666)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003828176
Putative uncharacterized protein {ECO:0000313|EMBL:EFL36485.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1160_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7745..8569
DNA (825bp) protein (275aa)
Putative hydrolase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK57_MICPN
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK33553.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_1160_11
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8591..8884)
DNA (294bp) protein (98aa)
XRE family transcriptional regulator Tax=Glaciibacter superstes RepID=UPI0003B5AD62
Uncharacterized protein {ECO:0000313|EMBL:KFF58269.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
plasmid maintenance system antidote protein
PLM3_5_b1_sep16_scaffold_1160_12
unknown

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comp(8972..9622)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4980A
PLM3_5_b1_sep16_scaffold_1160_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9759..10349
DNA (591bp) protein (197aa)
Peptidoglycan-binding domain 1 protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0M4_PSEUX
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:AEA27823.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_5_b1_sep16_scaffold_1160_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10491..10763)
DNA (273bp) protein (91aa)
Histidine kinase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0L7_PSEUX
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AEA27816.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_5_b1_sep16_scaffold_1160_15
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10705..11400)
DNA (696bp) protein (232aa)
Putative two-component histidine kinase Tax=Gordonia sputi NBRC 100414 RepID=H5U0Y3_9ACTO
histidine kinase
Putative two-component histidine kinase {ECO:0000313|EMBL:GAB39391.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
PLM3_5_b1_sep16_scaffold_1160_16
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11397..11714)
DNA (318bp) protein (106aa)
two-component histidine kinase (EC:2.7.13.-)
Putative two-component histidine kinase {ECO:0000313|EMBL:BAH48659.1}; EC=2.7.13.- {ECO:0000313|EMBL:BAH48659.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
ATPase Tax=Frankia sp. Iso899 RepID=UPI0003B3FA35
PLM3_5_b1_sep16_scaffold_1160_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11777..12376)
DNA (600bp) protein (200aa)
chemotaxis protein CheY Tax=Frankia sp. Iso899 RepID=UPI0003B46FA5
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV76906.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_5_b1_sep16_scaffold_1160_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12494..12778)
DNA (285bp) protein (95aa)
Antibiotic biosynthesis monooxygenase Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKE4_NAKMY
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ACV78706.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_5_b1_sep16_scaffold_1160_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12924..14093
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5A8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75188.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_5_b1_sep16_scaffold_1160_20
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14240..14755
DNA (516bp) protein (172aa)
Putative hydrolase Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N520_KITSK
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAJ26301.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM3_5_b1_sep16_scaffold_1160_21
unknown

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14801..14977
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1160_22
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14893..15672)
DNA (780bp) protein (260aa)
NAD-dependent epimerase/dehydratase Tax=Frankia sp. (strain CcI3) RepID=Q2JGN2_FRASC
NAD-dependent epimerase/dehydratase
Putative NADH-flavin reductase {ECO:0000313|EMBL:KDA43808.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM3_5_b1_sep16_scaffold_1160_23
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15769..16269
DNA (501bp) protein (167aa)
MarR family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B626C8
MarR family transcriptional regulator {ECO:0000313|EMBL:KIF68390.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
MarR family transcriptional regulator
PLM3_5_b1_sep16_scaffold_1160_24
unknown

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comp(16680..16913)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1160_25
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16924..17493
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C2M3_STRBB
Uncharacterized protein {ECO:0000313|EMBL:KJY16449.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
Displaying 25 items

View Taxonomy