ggKbase home page

PLM3_5_b1_sep16_scaffold_969_17

Organism: PLM3_5_b1_sep16_Aeromicrobium_marinum_63_8

near complete RP 46 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: comp(11895..12416)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WVK2_RENSM similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 176
  • Evalue 1.70e-41
transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 184
  • Evalue 1.80e-44
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AIY02417.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 184
  • Evalue 8.80e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Arthrobacter sp. PAMC25486 → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGATTCTCACCCCGGCGCGCGCCGCCCACACGCGGGAACAGAGCCCTGCCGTGCAAGACCGCATCCGGTCATTGTTGGCTGACATGCCCTCAGCGGTCGCACGGGTGGCCGAGTACTTACTCAAACACCCTCAGGCGCCGCTGACCTTGTCCATCGGCGAGCTTGCCGAGCAAGCCGGAGCCTCAGCAGCGACGGTCACTCGTTTCTGTCGGACGATTGGCTACCCCGGGTACGTCGAGCTTCGCGTCGGTATCGCCACCGATGTGGGACGCAGCGCCTCGCGTGACTCATGGTCGAGCGAGATCGGAGGGGAGTTCGGCCCCGACGACTCTCCGGAGGATCTGCTGCGGATGCTGATCAGCAGCCACACCAAGGCATTGCGAGAGGCGACCTCTGCTATCGATCTTGCCGTCATTACGGAGGTGTCGAGGCGGATCGCGCTGAGTTCGCATGTCGACATCTACGGCGTTGTCGGCAGTGCGATGCTCGCCGAGGAGCTGCAGAGGTCCACAGCGGGTTGA
PROTEIN sequence
Length: 174
VILTPARAAHTREQSPAVQDRIRSLLADMPSAVARVAEYLLKHPQAPLTLSIGELAEQAGASAATVTRFCRTIGYPGYVELRVGIATDVGRSASRDSWSSEIGGEFGPDDSPEDLLRMLISSHTKALREATSAIDLAVITEVSRRIALSSHVDIYGVVGSAMLAEELQRSTAG*