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PLM3_5_b1_sep16_scaffold_969

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_969_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_969_2
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(267..827)
DNA (561bp) protein (187aa)
response regulator/thioredoxin-disulfide reductase (EC:1.8.1.9)
Response regulator/thioredoxin-disulfide reductase Tax=Saccharopolyspora erythraea RepID=A4FQB2_SACEN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EQD86284.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM3_5_b1_sep16_scaffold_969_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(902..1123)
DNA (222bp) protein (74aa)
response regulator/thioredoxin-disulfide reductase (EC:1.8.1.9)
Response regulator/thioredoxin-disulfide reductase Tax=Saccharopolyspora erythraea RepID=A4FQB2_SACEN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EQD86284.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM3_5_b1_sep16_scaffold_969_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1231..1731)
DNA (501bp) protein (167aa)
response regulator/thioredoxin-disulfide reductase (EC:1.8.1.9)
Response regulator/thioredoxin-disulfide reductase {ECO:0000313|EMBL:CAM06237.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CAM06237.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Response regulator/thioredoxin-disulfide reductase Tax=Saccharopolyspora erythraea RepID=A4FQB2_SACEN
PLM3_5_b1_sep16_scaffold_969_5
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1741..1935)
DNA (195bp) protein (65aa)
Putative sigma factor Tax=Janibacter sp. HTCC2649 RepID=A3TNP3_9MICO
Putative sigma factor {ECO:0000313|EMBL:EAP98151.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_969_6
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1935..2957)
DNA (1023bp) protein (341aa)
Putative sigma factor Tax=Janibacter sp. HTCC2649 RepID=A3TNP3_9MICO
Putative sigma factor {ECO:0000313|EMBL:EAP98151.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_969_7
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2989..3357)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TNP2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN37782.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
dehydrogenase
PLM3_5_b1_sep16_scaffold_969_8
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3385..3951)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MW75_9ACTO
Putative secreted protein {ECO:0000313|EMBL:EAP98149.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
deaminase-reductase domain-containing protein
PLM3_5_b1_sep16_scaffold_969_9
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4154..4864)
DNA (711bp) protein (237aa)
transporter Tax=Curtobacterium sp. B8 RepID=UPI00034D8922
Transport protein {ECO:0000313|EMBL:CCH76793.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_969_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(4910..6709)
DNA (1800bp) protein (600aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036A1C6C
Tax=CSP1_3_Armatimonadetes
PLM3_5_b1_sep16_scaffold_969_11
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(7001..7282)
DNA (282bp) protein (94aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00035FEEA3
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:CCM64414.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_969_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7282..8208)
DNA (927bp) protein (309aa)
sugar ABC transporter permease Tax=Glaciibacter superstes RepID=UPI0003B5FC42
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL29460.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport system inner membrane protein
PLM3_5_b1_sep16_scaffold_969_13
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8205..9224)
DNA (1020bp) protein (340aa)
sugar ABC transporter permease Tax=Glaciibacter superstes RepID=UPI0003B4B1C0
Sugar ABC transporter permease {ECO:0000313|EMBL:ERI38449.2}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
ABC-type sugar transport system, permease component
PLM3_5_b1_sep16_scaffold_969_14
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9221..10642)
DNA (1422bp) protein (474aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B4DBAD
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAK36075.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_969_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10703..11470)
DNA (768bp) protein (256aa)
sugar isomerase Tax=Glaciibacter superstes RepID=UPI0003B51BA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ82238.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_5_b1_sep16_scaffold_969_16
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11467..11898)
DNA (432bp) protein (144aa)
sugar isomerase Tax=Glaciibacter superstes RepID=UPI0003B766F1
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AIY02417.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
PLM3_5_b1_sep16_scaffold_969_17
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11895..12416)
DNA (522bp) protein (174aa)
Transcriptional regulator, RpiR family Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WVK2_RENSM
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AIY02417.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
PLM3_5_b1_sep16_scaffold_969_18
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12510..13505
DNA (996bp) protein (332aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B78C7B
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EGD40578.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_969_19
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13560..14420
DNA (861bp) protein (287aa)
NAD-dependent epimerase/dehydratase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W5P5_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGZ44327.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_5_b1_sep16_scaffold_969_20

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comp(14424..14720)
DNA (297bp) protein (99aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035D0471
Enoyl-(Acyl carrier protein) reductase {ECO:0000313|EMBL:AIA14512.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase
PLM3_5_b1_sep16_scaffold_969_21

Not on your lists

comp(14717..15379)
DNA (663bp) protein (221aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W13_SOLUE
Glyoxalase-like domain protein {ECO:0000313|EMBL:AIA14513.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_5_b1_sep16_scaffold_969_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15456..15965)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000368417C
Uncharacterized protein {ECO:0000313|EMBL:ERK70250.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glycoside hydrolase family 3 domain-containing protein
Displaying 22 items

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