ggKbase home page

PLM3_5_b1_sep16_scaffold_10915

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_10915_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
Signal transduction histidine kinase CheA Tax=Nitrosospira sp. APG3 RepID=M5DJR3_9PROT
CheA signal transduction histidine kinases
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_5_b1_sep16_scaffold_10915_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289..2307)
DNA (2019bp) protein (673aa)
Methyl-accepting chemotaxis sensory transducer Tax=Roseiflexus sp. (strain RS-1) RepID=A5US05_ROSS1
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_5_b1_sep16_scaffold_10915_3
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2323..2850)
DNA (528bp) protein (176aa)
chemotaxis protein CheW
CheW protein bin=GWE2_Gallionellales_58_10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_5_b1_sep16_scaffold_10915_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2897..4435)
DNA (1539bp) protein (513aa)
cheR40H-2; protein glutamate methyltransferase CheR associated with MCPs of class 40H, TPR domain-containing
MCP methyltransferase, CheR-type bin=GWA2_OP3_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Protein glutamate methyltransferase CheR associated with MCPs of class 40H, TPR domain-containing {ECO:0000313|EMBL:ABB32925.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM3_5_b1_sep16_scaffold_10915_5
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4432..4875)
DNA (444bp) protein (148aa)
CheW protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAY5_AMMDK
chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:ACX51412.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
PLM3_5_b1_sep16_scaffold_10915_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5037..5987
DNA (951bp) protein (317aa)
Response regulator receiver modulated diguanylate cyclase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUD7_ACIC1
response regulator receiver modulated diguanylate cyclase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_5_b1_sep16_scaffold_10915_7
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6015..6683
DNA (669bp) protein (223aa)
nadE; NAD(+) synthetase (EC:6.3.5.1)
NAD(+) synthetase {ECO:0000313|EMBL:BAN04141.1}; EC=6.3.5.1 {ECO:0000313|EMBL:BAN04141.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
NAD(+) synthetase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A707_9ACTN
Displaying 7 items

View Taxonomy