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PLM3_5_b1_sep16_scaffold_5018_3

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(2065..2811)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Actinomadura flavalba RepID=UPI00037B3466 similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 249.0
  • Bit_score: 302
  • Evalue 2.30e-79
Probable transcriptional regulatory protein yebC {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 246.0
  • Bit_score: 304
  • Evalue 1.10e-79
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 249.0
  • Bit_score: 302
  • Evalue 1.10e-79

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGCGGGCATTCGAAGTGGTCGACAATCAAGCACCAGAAGGGCGCCAAGGACGCCAGGCGGGGCAAGCTGTTCGCCAAGCTGATCCGGGCCATCGAGGTCGCGGCCCGCGAGGGCGGCAGCACCCCCGAGGGCAACCCGACCCTGGCCGACGCCATCCAGAAGGCCAAGGACAACTCGGTCCCCAACGACACCATCGACCGGGCCGTCAAGCGGGGCGCCGGCGAGCTCGCCGGCCAGCGCCTGGAGCTGGCCACCTACGAGGCCTACGCCCCCGGCGGGGTGGCCCTGATGGTCGAGGCCCTGACCGACAACCGCAACCGGACCGCCGCCGACGTCCGCCACGTGGTCACCAAGGGCGGGGGCAGCCTGGCCGACGCCGGCAGCGTCGCCTACCTGTTCAACCGCCGCGGCCAGCTGGTGGTGCTGGGCGACGGGGTCGACGAGGACCGCGTCATGGAGGTCGCCCTTGAGGCCGGCGCCGAGGACGTCGAGGCCGACGAGCAGGGCTTCACCATCACCACCGCCCCCGGCGACCTGCGCGCCGTCCGCGCCGCCTTCGACACCGCCGGCATCTCCTACGACTCCGCCGAGGTCACCATGGTCCCCAGCATGTCGGTTCCCCTCGACCGCGACATCGCCCTGCGGGTCCTGCGCCTCCTCGACGCCCTCGAAGACCTCGACGACGTCCAGGACGTCTACGCCAACTTCGACATCCCCGACGACGTCATGGCCGAGGTCAGCTAG
PROTEIN sequence
Length: 249
MSGHSKWSTIKHQKGAKDARRGKLFAKLIRAIEVAAREGGSTPEGNPTLADAIQKAKDNSVPNDTIDRAVKRGAGELAGQRLELATYEAYAPGGVALMVEALTDNRNRTAADVRHVVTKGGGSLADAGSVAYLFNRRGQLVVLGDGVDEDRVMEVALEAGAEDVEADEQGFTITTAPGDLRAVRAAFDTAGISYDSAEVTMVPSMSVPLDRDIALRVLRLLDALEDLDDVQDVYANFDIPDDVMAEVS*