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PLM3_5_b1_sep16_scaffold_5018

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_5018_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(3..1031)
DNA (1029bp) protein (343aa)
Diguanylate cyclase/phosphodiesterase bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative diguanylate cyclase/phosphodiesterase with PAS sensor
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_5_b1_sep16_scaffold_5018_2
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1671..2072
DNA (402bp) protein (134aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Mycobacterium rhodesiae JS60 RepID=G4I1S1_MYCRH
Short-chain dehydrogenase {ECO:0000313|EMBL:KDF01367.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
3-oxoacyl-ACP reductase
PLM3_5_b1_sep16_scaffold_5018_3
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2065..2811)
DNA (747bp) protein (249aa)
transcriptional regulator Tax=Actinomadura flavalba RepID=UPI00037B3466
Probable transcriptional regulatory protein yebC {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_5018_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2808..3413)
DNA (606bp) protein (202aa)
pdxT; glutamine amidotransferase subunit pdxT (EC:2.6.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Glutamine amidotransferase subunit PdxT Tax=Modestobacter marinus (strain BC501) RepID=I4EZG1_MODMB
PLM3_5_b1_sep16_scaffold_5018_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(3417..4307)
DNA (891bp) protein (297aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
pyridoxal biosynthesis lyase Tax=Actinopolymorpha alba RepID=UPI00035DDBE2
pyridoxal biosynthesis lyase PdxS
PLM3_5_b1_sep16_scaffold_5018_6
unknown

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4524..4895
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_5018_7
unknown

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4945..5358
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_5018_8
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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5376..5855
DNA (480bp) protein (160aa)
Potassium transporter TrkA Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9F0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF10720.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /; LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).;"
PLM3_5_b1_sep16_scaffold_5018_9
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5862..6377
DNA (516bp) protein (172aa)
potassium transporter Tax=Streptomyces sp. BoleA5 RepID=UPI0003744752
putative transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:CCA59053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
Displaying 9 items

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