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PLM3_30_b1_sep16_scaffold_2055

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2055_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..229
DNA (228bp) protein (76aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative D-tyrosyl-tRNA(Tyr) deacylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
PLM3_30_b1_sep16_scaffold_2055_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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282..626
DNA (345bp) protein (115aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AIF83453.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AIF83453.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Methylated-DNA--protein-cysteine methyltransferase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMG3_9ARCH
PLM3_30_b1_sep16_scaffold_2055_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(632..856)
DNA (225bp) protein (75aa)
50S ribosomal protein L19e Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_2055_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(912..1442)
DNA (531bp) protein (177aa)
50S ribosomal protein L32e Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
rpl32e; 50S ribosomal protein L32e
R-protein L32e {ECO:0000313|EMBL:ADK26046.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3_30_b1_sep16_scaffold_2055_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1867..2577)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ING6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17300.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_2055_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2650..3009
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHD2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83375.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_2055_7
unknown

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comp(3077..3469)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2055_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3612..3935)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59584.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_2055_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4046..4618
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL00_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16076.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_2055_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4812..6413)
DNA (1602bp) protein (534aa)
pckA; ATP-dependent phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoenolpyruvate carboxykinase [ATP] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI5_NITGG
PLM3_30_b1_sep16_scaffold_2055_11
unknown

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comp(6545..6736)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2055_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7028..8572
DNA (1545bp) protein (515aa)
Putative 2-alkenal reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH63_NITGG
2-alkenal reductase
Putative 2-alkenal reductase {ECO:0000313|EMBL:AFU58173.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_2055_13
unknown

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comp(8607..9350)
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2055_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9701..10357)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ98_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60090.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 14 items

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