ggKbase home page

PLM3_30_b1_sep16_scaffold_2135

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2135_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2..835)
DNA (834bp) protein (278aa)
atpC; archaeal A1A0-type ATP synthase, subunit C (EC:3.6.3.14)
Archaeal A1A0-type ATP synthase, subunit C {ECO:0000313|EMBL:AIC16557.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIC16557.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Archaeal A1A0-type ATP synthase, subunit C Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG7_NITGG
PLM3_30_b1_sep16_scaffold_2135_2
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(918..1178)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3A8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ66201.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD31.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2135_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2228..2758)
DNA (531bp) protein (177aa)
Hemolysin-type calcium-binding region Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R560_ISOPI
Alkaline phosphatase {ECO:0000313|EMBL:KFE64345.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hemolysin-type calcium-binding protein
PLM3_30_b1_sep16_scaffold_2135_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2924..4246)
DNA (1323bp) protein (441aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ9_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU60468.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_2135_5
unknown

Not on your lists

4290..4460
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2135_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5064..5426)
DNA (363bp) protein (121aa)
Aspartate carbamoyltransferase regulatory chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM94_NITGG
aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_2135_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5701..6534)
DNA (834bp) protein (278aa)
short-chain dehydrogenase/reductase SDR bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
short-chain dehydrogenase of unknown substrate specificity
Tax=CSP1_1_Thaumarchaeota
PLM3_30_b1_sep16_scaffold_2135_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6736..9141
DNA (2406bp) protein (802aa)
Amino acid permease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT1_NITGG
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AFU59865.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_2135_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9345..10034
DNA (690bp) protein (230aa)
high-affinity Fe2+/Pb2+ permease
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:AIF84784.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_2135_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10061..11167
DNA (1107bp) protein (369aa)
Putative iron/lead transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8R4_NITGG
iron/lead transporter
Putative iron/lead transporter {ECO:0000313|EMBL:AFU57666.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 10 items

View Taxonomy