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PLM3_30_b1_sep16_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_13_1

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2..1231
DNA (1230bp) protein (410aa)
Serine protease Tax=uncultured organism RepID=D7GN83_9ZZZZ
Serine protease {ECO:0000313|EMBL:CBM43229.1}; Flags: Precursor;; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
peptidase S8 and S53 subtilisin kexin sedolisin
PLM3_30_b1_sep16_scaffold_13_2
unknown

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comp(1300..2364)
DNA (1065bp) protein (355aa)
hypothetical protein
PLM3_30_b1_sep16_scaffold_13_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2536..2823)
DNA (288bp) protein (96aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC15665.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_13_4
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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3171..4025
DNA (855bp) protein (285aa)
Hypothetical deacetylase Tax=uncultured Poribacteria bacterium 64K2 RepID=Q24M39_9BACT
putative xylanase/chitin deacetylase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
PLM3_30_b1_sep16_scaffold_13_5

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comp(4462..4818)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036C1709
Uncharacterized protein {ECO:0000313|EMBL:KKN43396.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
antibiotic biosynthesis monooxygenase
PLM3_30_b1_sep16_scaffold_13_6
unknown

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comp(5370..5621)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_7
unknown

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comp(6030..6581)
DNA (552bp) protein (184aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7577..7972
DNA (396bp) protein (132aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKK0_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU59808.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_13_9
unknown

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8124..8798
DNA (675bp) protein (225aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8785..9204)
DNA (420bp) protein (140aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW8_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58349.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_13_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9717..10271
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEM0_NITGG
Hemerythrin HHE cation binding domain protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AIC16036.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_13_12
unknown

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10400..10960
DNA (561bp) protein (187aa)
hypothetical protein
PLM3_30_b1_sep16_scaffold_13_13

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comp(11669..12175)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INW9_NITGG
Mut7-C RNAse domain protein {ECO:0000313|EMBL:KFM19752.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_13_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12463..13014)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFE2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83571.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_13_15
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13130..13549)
DNA (420bp) protein (140aa)
Cupin Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7U7_9ARCH
cupin
Cupin {ECO:0000313|EMBL:AFS81025.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3_30_b1_sep16_scaffold_13_16
unknown

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13653..13901
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13810..14652)
DNA (843bp) protein (281aa)
Dienelactone hydrolase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KI50_9ARCH
putative dienelactone hydrolase family
Putative dienelactone hydrolase family {ECO:0000313|EMBL:AIC16683.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_13_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15221..15622
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUA7_9ARCH
membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16975.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_13_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15820..16002)
DNA (183bp) protein (61aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377B1C0
DUF1059 domain containing protein {ECO:0000313|EMBL:EGP93511.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
putative small metal-binding protein
PLM3_30_b1_sep16_scaffold_13_20
unknown

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comp(16311..16817)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17056..18036)
DNA (981bp) protein (327aa)
Putative histone deacetylase superfamily Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY5_NITGG
histone deacetylase superfamily
Putative histone deacetylase superfamily {ECO:0000313|EMBL:AFU60184.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_13_22
unknown

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18243..18359
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18484..18855)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJT8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60355.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_13_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19177..20073
DNA (897bp) protein (299aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Protease HtpX homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDJ8_NITGG
protease htpX
PLM3_30_b1_sep16_scaffold_13_25
unknown

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comp(20241..20669)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_13_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20950..21195)
DNA (246bp) protein (82aa)
Zinc finger C2H2 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II08_NITGG
zinc finger C2H2 domain-containing protein
Zinc finger C2H2 domain-containing protein {ECO:0000313|EMBL:AIC14773.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_13_27
Pongo abelii, Pongo, Primates, Mammalia, Chordata, Metazoa

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comp(21475..21987)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Pongo abelii RepID=K7ETQ2_PONAB
Uncharacterized protein {ECO:0000313|Ensembl:ENSPPYP00000023925}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo.;" source="Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_13_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22343..22591)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILV4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82090.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_13_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(22607..22873)
DNA (267bp) protein (89aa)
hypothetical protein
hypothetical protein bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_16_Archaea_50_20_curated
PLM3_30_b1_sep16_scaffold_13_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22886..23680)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59700.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 121 in total

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