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PLM3_30_b1_sep16_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_22_trna_1
unknown

Not on your lists

2..75
DNA (74bp)
transferRNA Thr
PLM3_30_b1_sep16_scaffold_22_1
unknown

Not on your lists

comp(594..866)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_2
unknown

Not on your lists

comp(1036..1761)
DNA (726bp) protein (242aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_3
unknown

Not on your lists

2002..2232
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_4
unknown

Not on your lists

2509..2934
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_5
unknown

Not on your lists

comp(3211..3363)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_6
unknown

Not on your lists

comp(3708..3854)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3879..4850)
DNA (972bp) protein (324aa)
Putative integrase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFN9_NITGG
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AIF85030.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_22_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4866..6689)
DNA (1824bp) protein (608aa)
pox; pyruvate dehydrogenase/pyruvate oxidase (EC:1.2.3.3)
Putative pyruvate dehydrogenase/ pyruvate oxidase {ECO:0000313|EMBL:AFU59573.1}; EC=1.2.3.3 {ECO:0000313|EMBL:AFU59573.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative pyruvate dehydrogenase/ pyruvate oxidase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK18_NITGG
PLM3_30_b1_sep16_scaffold_22_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7012..8598
DNA (1587bp) protein (529aa)
transketolase, beta subunit (EC:2.2.1.1)
Transketolase, beta subunit {ECO:0000313|EMBL:AIF82683.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AIF82683.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Transketolase, N-terminal subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG57_NITGG
PLM3_30_b1_sep16_scaffold_22_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8585..9559
DNA (975bp) protein (325aa)
tktB; transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AFU60392.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFU60392.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Transketolase, C-terminal subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
PLM3_30_b1_sep16_scaffold_22_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9556..10218
DNA (663bp) protein (221aa)
tal; transaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable transaldolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG0_NITGG
PLM3_30_b1_sep16_scaffold_22_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10271..11851)
DNA (1581bp) protein (527aa)
Putative von Willebrand factor type A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP27_NITGG
putative von Willebrand factor type A domain protein
Putative von Willebrand factor type A domain protein {ECO:0000313|EMBL:AIC16034.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_22_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(11856..12665)
DNA (810bp) protein (270aa)
Putative NorQ like ATPase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW3_NITGG
NorQ like ATPase
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3_30_b1_sep16_scaffold_22_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12713..14065)
DNA (1353bp) protein (451aa)
Putative von Willebrand factor type A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC1_NITGG
putative von Willebrand factor type A
Putative von Willebrand factor type A {ECO:0000313|EMBL:AIC15039.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_22_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14052..15695)
DNA (1644bp) protein (548aa)
Putative Mg-chelatase subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX7_NITGG
Mg-chelatase subunit
Putative Mg-chelatase subunit {ECO:0000313|EMBL:AFU59115.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


15835..16413
DNA (579bp) protein (193aa)
30S ribosomal protein S13 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKR3_NITGG
SSU ribosomal protein S13P
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_22_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


16423..16926
DNA (504bp) protein (168aa)
30S ribosomal protein S4p Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ31_NITGG
30S ribosomal protein S4 {ECO:0000256|SAAS:SAAS00016650}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rps4p; 30S ribosomal protein S4p
PLM3_30_b1_sep16_scaffold_22_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16948..17907)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59119.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18092..19852
DNA (1761bp) protein (587aa)
glmS1; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:AFU59120.1}; EC=2.6.1.16 {ECO:0000313|EMBL:AFU59120.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glucosamine-fructose-6-phosphate aminotransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGY0_NITGG
PLM3_30_b1_sep16_scaffold_22_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19907..21001)
DNA (1095bp) protein (365aa)
UPF0284 protein Ngar_c14260 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC7_NITGG
hypothetical protein
UPF0284 protein Ngar_c14260 {ECO:0000256|HAMAP-Rule:MF_01086}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21005..21625)
DNA (621bp) protein (207aa)
gloB; beta-lactamase-like protein (EC:3.1.2.6)
Beta-lactamase-like protein {ECO:0000313|EMBL:AFU58361.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AFU58361.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Beta-lactamase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAL2_NITGG
PLM3_30_b1_sep16_scaffold_22_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21628..22314)
DNA (687bp) protein (229aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NAD(P)H-hydrate epimerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF08_NITGG
carbohydrate kinase
PLM3_30_b1_sep16_scaffold_22_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22373..22954)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGN3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57993.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23155..23802
DNA (648bp) protein (216aa)
Translin family protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2E8_9ARCH
putative RNA-binding protein of the translin family
Putative RNA-binding protein of the translin family {ECO:0000313|EMBL:AIF84676.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_22_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23808..25271)
DNA (1464bp) protein (488aa)
Putative digeranylgeranylglycerophospholipid reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM9_NITGG
digeranylgeranylglycerophospholipid reductase
Putative digeranylgeranylglycerophospholipid reductase {ECO:0000313|EMBL:AFU57988.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_trna_3
unknown

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comp(25336..25444)
DNA (109bp)
transferRNA Leu
PLM3_30_b1_sep16_scaffold_22_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25570..25869
DNA (300bp) protein (100aa)
Putative nucleic acid binding OB-fold tRNA/helicase-type Tax=Candidatus Nitrososphaera gargensis RepID=K0IH57_NITGG
nucleic acid binding OB-fold tRNA/helicase-type
Putative nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:AFU59210.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25934..26734)
DNA (801bp) protein (267aa)
Putative 3-isopropylmalate dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE0_NITGG
3-isopropylmalate dehydratase
Putative 3-isopropylmalate dehydratase {ECO:0000313|EMBL:AFU59209.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_22_28
Oxytricha trifallax, Oxytricha, Sporadotrichida, Stichotrichia, Eukaryota

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comp(26836..27531)
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Oxytricha trifallax RepID=J9I446_9SPIT
Uncharacterized protein {ECO:0000313|EMBL:EJY68168.1}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.;" source="Oxytricha trifallax.;"
CHRD domain-containing protein
Displaying items 1-30 of 57 in total

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