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PLM3_30_b1_sep16_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_186_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1379..1900
DNA (522bp) protein (174aa)
RDD family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I736_NITGG
putative membrane protein/domain
Putative membrane protein/domain {ECO:0000313|EMBL:AIF84565.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_186_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2361..3431
DNA (1071bp) protein (357aa)
BNR/Asp-box repeats-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX2_NITGG
BNR/Asp-box repeats-containing protein
BNR/Asp-box repeats-containing protein {ECO:0000313|EMBL:AFU58077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_3
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3565..4863)
DNA (1299bp) protein (433aa)
Class H tetracycline resistance efflux protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EA2_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB79476.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Tetracycline resistance protein
PLM3_30_b1_sep16_scaffold_186_4
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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5087..5362
DNA (276bp) protein (92aa)
Isopeptidase T Tax=Gloeobacter kilaueensis JS1 RepID=U5QLA3_9CYAN
Isopeptidase T
Isopeptidase T {ECO:0000313|EMBL:AGY58364.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM3_30_b1_sep16_scaffold_186_5
CSP1_5_NC10, NC10, Bacteria

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5407..6126
DNA (720bp) protein (240aa)
hypothetical protein bin=bin3_NC10 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3_30_b1_sep16_scaffold_186_6
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6298..6534
DNA (237bp) protein (79aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003616E5B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
PLM3_30_b1_sep16_scaffold_186_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6754..7059
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85286.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_186_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7196..8104)
DNA (909bp) protein (303aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INV4_NITGG
glyoxalase/bleomycin resistance protein/dioxygenase
Putative glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AFU60029.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8157..8597)
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4G5_METSW
Putative ester cyclase {ECO:0000313|EMBL:KCZ70593.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_186_10
unknown

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8857..9048
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_186_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9117..9572)
DNA (456bp) protein (152aa)
BNR/Asp-box repeat domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9H1_NITGG
BNR/Asp-box repeat domain-containing protein
BNR/Asp-box repeat domain-containing protein {ECO:0000313|EMBL:AFU58001.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10092..10478
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6V8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17260.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_186_13
unknown

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10739..11494
DNA (756bp) protein (252aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_186_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11853..12473)
DNA (621bp) protein (207aa)
Major intrinsic protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGI3_NITGG
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:AFU60496.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12523..12951)
DNA (429bp) protein (143aa)
arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000313|EMBL:AFU60495.1}; EC=1.20.4.1 {ECO:0000313|EMBL:AFU60495.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arsenate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK34_NITGG
PLM3_30_b1_sep16_scaffold_186_16
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12948..13727)
DNA (780bp) protein (260aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV95_9ARCH
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EGP93210.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase:UbiE/COQ5 methyltransferase
PLM3_30_b1_sep16_scaffold_186_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13794..14180
DNA (387bp) protein (129aa)
Putative transcriptional regulator, HxlR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL5_NITGG
HxlR family transcriptional regulator
Putative transcriptional regulator, HxlR family {ECO:0000313|EMBL:AFU60493.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14272..14478)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15791.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_186_19
unknown

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comp(16299..16529)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_186_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17079..17963
DNA (885bp) protein (295aa)
Methyl-accepting chemotaxis sensory transducer Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J861_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83573.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_186_21

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18045..19043
DNA (999bp) protein (333aa)
Methyltransferase type 11 (McyJ) {ECO:0000313|EMBL:AIF19286.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_86_E11.;"
type 11 methyltransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Methyltransferase type 11
PLM3_30_b1_sep16_scaffold_186_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(19432..20268)
DNA (837bp) protein (279aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI00035D4A43
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_30_b1_sep16_scaffold_186_23
unknown

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comp(20401..20682)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_186_24
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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20899..21444
DNA (546bp) protein (182aa)
Regulatory protein Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVX6_THEON
regulatory protein
Regulatory protein {ECO:0000313|EMBL:ACJ16299.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strain NA1).;"
PLM3_30_b1_sep16_scaffold_186_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21456..21782
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59564.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_186_26
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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22017..23192
DNA (1176bp) protein (392aa)
NurA nuclease Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E1B0_METI4
NurA nuclease
NurA nuclease {ECO:0000313|EMBL:ACD82906.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
PLM3_30_b1_sep16_scaffold_186_27
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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23179..24825
DNA (1647bp) protein (549aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SP53_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL57939.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
ATPase AAA
PLM3_30_b1_sep16_scaffold_186_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24892..25785)
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ72_NITGG
putative metal-binding integral membrane protein
Putative metal-binding integral membrane protein {ECO:0000313|EMBL:AIF85527.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_186_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25856..26197)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B5851A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_186_30
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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26354..26845
DNA (492bp) protein (164aa)
3-demethylubiquinone-9 3-methyltransferase Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IYY0_PSEUL
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:BAK75733.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
Displaying items 1-30 of 62 in total

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