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PLM3_30_b1_sep16_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_232_1
unknown

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2..184
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_232_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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693..1877
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A577_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83075.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_232_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1965..2561
DNA (597bp) protein (199aa)
Putative transcriptional regulator, TetR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IES4_NITGG
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF83074.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_232_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2572..2757)
DNA (186bp) protein (62aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83932.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_232_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2892..3482)
DNA (591bp) protein (197aa)
Integrase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIR7_NITGG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AFU59840.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_232_6
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3531..4085)
DNA (555bp) protein (185aa)
Sulfur carrier protein ThiS Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B911_9ARCH
sulfur carrier protein ThiS
Sulfur carrier protein ThiS {ECO:0000313|EMBL:AFS81435.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3_30_b1_sep16_scaffold_232_7
unknown

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comp(4119..4370)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_232_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4393..4614)
DNA (222bp) protein (74aa)
30S ribosomal protein S17e Tax=Candidatus Nitrososphaera gargensis RepID=K0IKK7_NITGG
ribosomal protein S17E
30S ribosomal protein S17e {ECO:0000256|SAAS:SAAS00278999}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_232_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4672..5442)
DNA (771bp) protein (257aa)
Putative TatD-like deoxyribonuclease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIU9_NITGG
TatD-like deoxyribonuclease
Putative TatD-like deoxyribonuclease {ECO:0000313|EMBL:AFU59008.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_232_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5505..5714)
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKC0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58812.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_232_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6072..6368)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL20_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59267.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_232_12
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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6548..7207
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2Y8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPA05650.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
PLM3_30_b1_sep16_scaffold_232_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7272..9497)
DNA (2226bp) protein (742aa)
AAA family ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:AIC16607.1}; EC=3.6.4.6 {ECO:0000313|EMBL:AIC16607.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
AAA family ATPase, CDC48 subfamily protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM48_NITGG
AAA family ATPase, CDC48 subfamily
PLM3_30_b1_sep16_scaffold_232_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9702..10433
DNA (732bp) protein (244aa)
50S ribosomal protein L2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ID46_NITGG
rpl2p; 50S ribosomal protein L2p
R-protein L2p {ECO:0000313|EMBL:ADK26020.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3_30_b1_sep16_scaffold_232_15
uncultured crenarchaeote, Crenarchaeota, Archaea

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10502..11161
DNA (660bp) protein (220aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
Endonuclease III Tax=uncultured crenarchaeote RepID=Q702G0_9CREN
endonuclease III
PLM3_30_b1_sep16_scaffold_232_16
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(11158..11796)
DNA (639bp) protein (213aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702F9_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28665.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_232_17
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

comp(11863..13002)
DNA (1140bp) protein (380aa)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00066}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
sat; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=uncultured crenarchaeote RepID=Q702F8_9CREN
PLM3_30_b1_sep16_scaffold_232_18
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(13009..13764)
DNA (756bp) protein (252aa)
Putative PAPS reductase Tax=uncultured crenarchaeote RepID=Q702F7_9CREN
Putative PAPS reductase {ECO:0000313|EMBL:CAF28667.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PAPS reductase
PLM3_30_b1_sep16_scaffold_232_19
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

13964..15286
DNA (1323bp) protein (441aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702F6_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28668.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_232_20

Not on your lists

15356..15787
DNA (432bp) protein (144aa)
HIT-like protein HinT {ECO:0000313|EMBL:KFM15153.1}; EC=3.6.1.29 {ECO:0000313|EMBL:KFM15153.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O18.;"
Putative HIT superfamily hydrolase Tax=uncultured crenarchaeote RepID=Q702F5_9CREN
histidine triad (HIT) protein
PLM3_30_b1_sep16_scaffold_232_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15824..16519)
DNA (696bp) protein (232aa)
Phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9F3_NITGG
phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family
Phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family {ECO:0000313|EMBL:AIC15485.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_232_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16588..17040)
DNA (453bp) protein (151aa)
Heme-containing membrane protein CtaA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL86_NITGG
ctaA; heme-containing membrane protein CtaA
Heme-containing membrane protein CtaA {ECO:0000313|EMBL:AFU56954.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_232_23
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

17430..18197
DNA (768bp) protein (256aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702F3_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28671.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_232_24
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

comp(18244..19209)
DNA (966bp) protein (322aa)
Putative CorA-like transport protein Tax=uncultured crenarchaeote RepID=Q702F2_9CREN
Putative CorA-like transport protein {ECO:0000313|EMBL:CAF28672.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
corA; CorA ion transporter
PLM3_30_b1_sep16_scaffold_232_25
uncultured crenarchaeote, Crenarchaeota, Archaea

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19326..19634
DNA (309bp) protein (103aa)
Putative Rieske-type ferredoxin Tax=uncultured crenarchaeote RepID=Q702F1_9CREN
Putative Rieske-type ferredoxin {ECO:0000313|EMBL:CAF28673.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
rieske (2Fe-2S) domain-containing protein
PLM3_30_b1_sep16_scaffold_232_26
uncultured crenarchaeote, Crenarchaeota, Archaea

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20238..21428
DNA (1191bp) protein (397aa)
mngA2; mannosyl-3-phosphoglycerate synthase (EC:2.4.1.217)
Putative mannosyl-3-phosphoglycerate synthase Tax=uncultured crenarchaeote RepID=Q702E9_9CREN
Putative mannosyl-3-phosphoglycerate synthase {ECO:0000313|EMBL:CAF28675.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3_30_b1_sep16_scaffold_232_27
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(21497..22318)
DNA (822bp) protein (274aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702E8_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28676.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_232_28
uncultured crenarchaeote, Crenarchaeota, Archaea

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22466..22891
DNA (426bp) protein (142aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702E7_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28677.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_232_29
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

comp(22902..23999)
DNA (1098bp) protein (366aa)
purP2; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate ligase (EC:6.3.4.-)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702E6_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28678.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3_30_b1_sep16_scaffold_232_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24078..24398)
DNA (321bp) protein (107aa)
TatA subunit of twin-arginine targeting system Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILT9_NITGG
tatA2; TatA subunit of twin-arginine targeting system
TatA subunit of twin-arginine targeting system {ECO:0000313|EMBL:AIC15802.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying items 1-30 of 31 in total

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