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PLM3_30_b1_sep16_scaffold_494

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_494_1
uncultured crenarchaeote, Crenarchaeota, Archaea

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1..633
DNA (633bp) protein (211aa)
Putative anaerobic ribonucleoside triphosphate reductase Tax=uncultured crenarchaeote RepID=Q702B4_9CREN
Putative anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:CAF28710.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
putative anaerobic ribonucleoside-triphosphate reductase
PLM3_30_b1_sep16_scaffold_494_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(883..1038)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH53_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59200.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_494_3
uncultured crenarchaeote, Crenarchaeota, Archaea

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1590..4316
DNA (2727bp) protein (909aa)
nrdZ; ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=uncultured crenarchaeote RepID=Q702B6_9CREN
Putative ribonucleotide reductase alpha subunit {ECO:0000313|EMBL:CAF28708.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3_30_b1_sep16_scaffold_494_4
uncultured crenarchaeote, Crenarchaeota, Archaea

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4503..5168
DNA (666bp) protein (222aa)
Translation initiation factor 6 Tax=uncultured crenarchaeote RepID=Q702B7_9CREN
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
translation initiation factor 6 (aeIF-6)
PLM3_30_b1_sep16_scaffold_494_5
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(5274..6176)
DNA (903bp) protein (301aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702B8_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28706.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_494_6
uncultured crenarchaeote, Crenarchaeota, Archaea

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6334..7272
DNA (939bp) protein (313aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase Tax=uncultured crenarchaeote RepID=Q702B9_9CREN
PLM3_30_b1_sep16_scaffold_494_7
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(7367..8281)
DNA (915bp) protein (305aa)
ilvE2; branched-chain amino-acid aminotransferase (EC:2.6.1.42)
Putative branched chain amino acid aminotransferase Tax=uncultured crenarchaeote RepID=Q702C0_9CREN
Putative branched chain amino acid aminotransferase {ECO:0000313|EMBL:CAF28704.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3_30_b1_sep16_scaffold_494_8
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(8278..9684)
DNA (1407bp) protein (469aa)
aspartokinase (EC:2.7.2.4)
Putative aspartokinase I homoserine dehydrogenase Tax=uncultured crenarchaeote RepID=Q702C1_9CREN
Putative aspartokinase I homoserine dehydrogenase {ECO:0000313|EMBL:CAF28703.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3_30_b1_sep16_scaffold_494_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10524..10841
DNA (318bp) protein (106aa)
Putative transposase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG
transposase
Putative transposase {ECO:0000313|EMBL:AFU59199.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_494_10
unknown

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comp(10903..11568)
DNA (666bp) protein (222aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_11

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11718..12221
DNA (504bp) protein (168aa)
Putative transcriptional regulator PadR-like family protein Tax=uncultured archaeon RepID=I3RKH5_9ARCH
Putative transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AFK24835.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PadR-like family transcriptional regulator
PLM3_30_b1_sep16_scaffold_494_12

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12257..12601
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKM7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24887.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_494_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12831..13145)
DNA (315bp) protein (105aa)
Cupin domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG5_NITGG
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AFU58343.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_494_14
unknown

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13269..13397
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_15
unknown

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comp(13394..13519)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_16
unknown

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comp(13548..13814)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_17
unknown

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14404..14607
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_18
unknown

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15573..15803
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_19
unknown

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15913..16113
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_20
unknown

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comp(16310..16678)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_494_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16828..17103
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMS8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58154.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_494_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17106..17552
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEF6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58155.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_494_23
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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17784..18371
DNA (588bp) protein (196aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI000381BDD1
multidrug transporter
Tax=RBG_16_Deltaproteobacteria_50_11_curated
Displaying 23 items

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