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PLM3_30_b1_sep16_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_543_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..221
DNA (219bp) protein (73aa)
50S ribosomal protein L19e Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
R-protein L19e {ECO:0000313|EMBL:ADK26036.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3_30_b1_sep16_scaffold_543_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(227..574)
DNA (348bp) protein (116aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AIF83453.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AIF83453.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Methylated-DNA--protein-cysteine methyltransferase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMG3_9ARCH
PLM3_30_b1_sep16_scaffold_543_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(627..1439)
DNA (813bp) protein (271aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative D-tyrosyl-tRNA(Tyr) deacylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
PLM3_30_b1_sep16_scaffold_543_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1554..4532)
DNA (2979bp) protein (993aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
PLM3_30_b1_sep16_scaffold_543_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4525..7278)
DNA (2754bp) protein (918aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF9_NITGG
PLM3_30_b1_sep16_scaffold_543_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7677..8996
DNA (1320bp) protein (440aa)
aspS2; aspartate--tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase {ECO:0000313|EMBL:AIC15653.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AIC15653.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Aspartate--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K0_NITGG
PLM3_30_b1_sep16_scaffold_543_7
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9030..9302
DNA (273bp) protein (91aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VYG1_THESW
aspartyl/glutamyl-tRNA amidotransferase subunit C
PLM3_30_b1_sep16_scaffold_543_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9304..10749
DNA (1446bp) protein (482aa)
gatA; glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ1_NITGG
PLM3_30_b1_sep16_scaffold_543_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10746..12188
DNA (1443bp) protein (481aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEL7_NITGG
PLM3_30_b1_sep16_scaffold_543_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12258..13496)
DNA (1239bp) protein (413aa)
LOR/SDH bifunctional protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7J4_NITGG
LOR/SDH bifunctional protein
LOR/SDH bifunctional protein {ECO:0000313|EMBL:AFU57211.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_543_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13530..13883)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57204.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_543_12
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13861..14439)
DNA (579bp) protein (193aa)
Metal dependent phosphohydrolase Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCJ8_9ARCH
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFS82750.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3_30_b1_sep16_scaffold_543_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14707..15261)
DNA (555bp) protein (185aa)
ATP--cobalamin adenosyltransferase Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB60_9ARCH
putative ATP--cobalamin adenosyltransferase
Putative ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:AIC15638.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_543_14
unknown

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comp(15404..15565)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_trna_1
unknown

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15706..15799
DNA (94bp)
transferRNA Ile
PLM3_30_b1_sep16_scaffold_543_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16227..16484)
DNA (258bp) protein (86aa)
Putative transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INQ4_NITGG
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU59779.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_543_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16556..17377)
DNA (822bp) protein (274aa)
Putative adenylate/guanylate cyclase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB7_NITGG
putative adenylate/guanylate cyclase
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:AIC14201.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_543_17
unknown

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17833..18051
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_18
unknown

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comp(18129..18320)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_19
unknown

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18695..18949
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_20
Leptospira santarosai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(18985..20478)
DNA (1494bp) protein (498aa)
Uncharacterized protein Tax=Leptospira santarosai RepID=M6WLN7_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EMO99543.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira santarosai str. 200702252.;"
PLM3_30_b1_sep16_scaffold_543_21
unknown

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20517..20783
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_22
unknown

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20832..21341
DNA (510bp) protein (170aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_543_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21905..22465
DNA (561bp) protein (187aa)
hypothetical protein Tax=Nitrosopumilus sp. AR RepID=UPI0003794B41
Short C-terminal domain
Short C-terminal domain {ECO:0000313|EMBL:AIF82183.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_543_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22617..23477
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59321.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_543_25
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23559..24788
DNA (1230bp) protein (410aa)
threonine ammonia-lyase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase, medium form {ECO:0000313|EMBL:AIF83385.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AIF83385.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Threonine ammonia-lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID68_NITGG
PLM3_30_b1_sep16_scaffold_543_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24785..26209)
DNA (1425bp) protein (475aa)
hcs; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:AFU59333.1}; EC=2.3.3.10 {ECO:0000313|EMBL:AFU59333.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Hydroxymethylglutaryl-CoA synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH9_NITGG
PLM3_30_b1_sep16_scaffold_543_27
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(26387..27508)
DNA (1122bp) protein (374aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
FO synthase subunit 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILR6_NITGG
de-hypoxanthine futalosine cyclase
PLM3_30_b1_sep16_scaffold_543_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27610..28701
DNA (1092bp) protein (364aa)
cofH3; FO synthase subunit 2 (EC:2.5.1.-)
FO synthase subunit 2 {ECO:0000313|EMBL:AFU59628.1}; EC=2.5.1.- {ECO:0000313|EMBL:AFU59628.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
FO synthase subunit 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK72_NITGG
PLM3_30_b1_sep16_scaffold_543_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(28731..29588)
DNA (858bp) protein (286aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILR8_NITGG
hypothetical protein
Displaying items 1-30 of 33 in total

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