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PLM3_30_b1_sep16_scaffold_688

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_688_1
unknown

Not on your lists

3..299
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_2
unknown

Not on your lists

482..661
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

791..1357
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TW7_STIAD
Carbohydrate-binding protein {ECO:0000313|EMBL:KFA88234.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_688_4
unknown

Not on your lists

1629..2204
DNA (576bp) protein (192aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_5
unknown

Not on your lists

2776..3258
DNA (483bp) protein (161aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_6
unknown

Not on your lists

comp(3440..3877)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_7
unknown

Not on your lists

comp(4544..4681)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4882..5175
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJV6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58552.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_688_9
unknown

Not on your lists

comp(5075..5284)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_10

Not on your lists

comp(5319..5783)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE91901.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_17_C04.;"
PLM3_30_b1_sep16_scaffold_688_11
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5794..6687)
DNA (894bp) protein (298aa)
Response regulator receiver protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVD5_9ARCH
Response regulator receiver protein {ECO:0000313|EMBL:EGP93237.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
B12 binding domain protein
PLM3_30_b1_sep16_scaffold_688_12

Not on your lists

comp(6800..8248)
DNA (1449bp) protein (483aa)
UDP-glucose 4-epimerase protein {ECO:0000313|EMBL:KFM18874.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KFM18874.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
NAD-dependent epimerase/dehydratase Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B9T1_9ARCH
NAD dependent epimerase/dehydratase family protein
PLM3_30_b1_sep16_scaffold_688_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8307..8876)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ65_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58247.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_688_14
unknown

Not on your lists

8984..9103
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9271..9579
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58575.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_688_16
unknown

Not on your lists

9715..9999
DNA (285bp) protein (95aa)
hypothetical protein
PLM3_30_b1_sep16_scaffold_688_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10422..11645)
DNA (1224bp) protein (408aa)
Putative sodium/hydrogen exchanger Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ING9_NITGG
sodium/hydrogen exchanger
Putative sodium/hydrogen exchanger {ECO:0000313|EMBL:AFU59354.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_688_18
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11845..12426
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXE5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93947.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
PLM3_30_b1_sep16_scaffold_688_19
unknown

Not on your lists

12552..13418
DNA (867bp) protein (289aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13626..14144
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHJ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84828.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_688_21
unknown

Not on your lists

comp(14433..15140)
DNA (708bp) protein (236aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_688_22
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(15243..15851)
DNA (609bp) protein (203aa)
Archaemetzincin Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEE8_PYRF1
peptidase zinc-dependent
Tax=RBG_13_Chloroflexi_50_10_curated
PLM3_30_b1_sep16_scaffold_688_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16020..16532
DNA (513bp) protein (171aa)
hypothetical protein Tax=unclassified Crenarchaeota RepID=UPI00035E1986
nitroreductase-like protein
Nitroreductase-like protein {ECO:0000313|EMBL:AIC14841.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_688_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16879..17556)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INN5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84734.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_688_25
Stylonychia lemnae, Stylonychia, Sporadotrichida, Stichotrichia, Eukaryota

Not on your lists

18145..18756
DNA (612bp) protein (204aa)
PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform 4 Tax=Macaca mulatta RepID=UPI0000D9A489
Peptide-n-(N-acetyl-beta-glucosaminyl)asparagine {ECO:0000313|EMBL:CDW85087.1}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Stylonychinae; Stylonychia.;" source="Stylonychia lemnae.;"
PLM3_30_b1_sep16_scaffold_688_26
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19343..19636
DNA (294bp) protein (98aa)
hypothetical protein Tax=Streptomyces chartreusis RepID=UPI0002630065
GYD domain protein {ECO:0000313|EMBL:EKX69200.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_688_27
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

19930..20370
DNA (441bp) protein (147aa)
Oxidoreductase, short chain dehydrogenase/reductase family Tax=Bacillus megaterium WSH-002 RepID=G2RLN3_BACME
short chain dehydrogenase/reductase family oxidoreductase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_30_b1_sep16_scaffold_688_28
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20408..20602
DNA (195bp) protein (65aa)
Short-chain dehydrogenase/reductase SDR Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SSV1_FERBD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADN77105.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT).;"
PLM3_30_b1_sep16_scaffold_688_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20865..21113)
DNA (249bp) protein (83aa)
Putative stress response protein YsnF Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHC9_NITGG
conserved domain protein, TIGR02271+C111
Conserved domain protein, TIGR02271+C111 {ECO:0000313|EMBL:AIF82751.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_688_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21380..21640
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59543.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 40 in total

View Taxonomy