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PLM3_30_b1_sep16_scaffold_726

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_726_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..461)
DNA (459bp) protein (153aa)
Putative integrase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFN9_NITGG
integrase family protein
Putative integrase family protein {ECO:0000313|EMBL:AFU58630.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_726_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1152..1694)
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEJ2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58170.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_726_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1810..2130)
DNA (321bp) protein (107aa)
Putative uncharacterized protein HGIII-43 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q4LEF5_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82886.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_726_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2292..2615
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15818.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_726_5
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2690..3259)
DNA (570bp) protein (190aa)
hypothetical protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
PLM3_30_b1_sep16_scaffold_726_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3382..3600)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM25_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59922.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_726_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4441..4710)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59218.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_726_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5168..6526
DNA (1359bp) protein (453aa)
Extracellular solute-binding protein family 1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BIN2_PETMO
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AIF83558.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_726_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7312..8307)
DNA (996bp) protein (332aa)
Kelch repeat-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGP3_NITGG
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:AFU56982.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_726_10
unknown

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8649..9182
DNA (534bp) protein (178aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_726_11
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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9242..11257
DNA (2016bp) protein (672aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (modular protein)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (Modular protein) {ECO:0000313|EMBL:AJM91772.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3_30_b1_sep16_scaffold_726_12
unknown

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comp(11863..12204)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_726_13
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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14048..14410
DNA (363bp) protein (121aa)
Cupin domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN49_NITGG
cupin domain-containing protein
Tax=RBG_16_RIF03_38_11_curated
PLM3_30_b1_sep16_scaffold_726_14
unknown

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14959..15354
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_726_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15616..15906
DNA (291bp) protein (97aa)
Rieske (2Fe-2S) domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHL1_METPE
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AIF85063.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 15 items

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