ggKbase home page

PLM3_30_b1_sep16_scaffold_1347

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1347_1
unknown

Not on your lists

1..204
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1347_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(372..1808)
DNA (1437bp) protein (479aa)
Amidohydrolase Tax=Oceanibaculum indicum P24 RepID=K2J6S6_9PROT
Amidohydrolase {ECO:0000313|EMBL:EKE78766.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
amidohydrolase
PLM3_30_b1_sep16_scaffold_1347_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1805..2848)
DNA (1044bp) protein (348aa)
Peptide ABC transporter ATP-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TPE8_9PROT
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDP65200.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
probabable abc transporter atp binding abc transporter protein
PLM3_30_b1_sep16_scaffold_1347_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2841..3878)
DNA (1038bp) protein (346aa)
peptide ABC transporter ATP-binding protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI000367EB99
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC48609.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_30_b1_sep16_scaffold_1347_5
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3885..4772)
DNA (888bp) protein (296aa)
ABC transporter permease Tax=Oceanibaculum indicum P24 RepID=K2K497_9PROT
Peptide ABC transporter permease {ECO:0000313|EMBL:KIF13101.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
ABC transporter permease
PLM3_30_b1_sep16_scaffold_1347_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4780..5721)
DNA (942bp) protein (314aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036FB026
peptide ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_30_b1_sep16_scaffold_1347_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5752..7338)
DNA (1587bp) protein (529aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003709ED8
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETW96142.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter substrate-binding protein
PLM3_30_b1_sep16_scaffold_1347_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7415..8821)
DNA (1407bp) protein (469aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036874C4
putative hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_30_b1_sep16_scaffold_1347_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8927..9841)
DNA (915bp) protein (305aa)
SMP-30/gluconolaconase/LRE domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2J2R0_9PROT
SMP-30/gluconolaconase/LRE domain-containing protein {ECO:0000313|EMBL:EKE77261.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
gluconolactonase
PLM3_30_b1_sep16_scaffold_1347_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..10738)
DNA (777bp) protein (259aa)
Probable GntR-family transcriptional regulator Tax=Bordetella bronchiseptica RepID=K4T4Y5_BORBO
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:KCV66743.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
GntR family transcriptional regulator
PLM3_30_b1_sep16_scaffold_1347_11
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10851..11705
DNA (855bp) protein (285aa)
ABC-type transporter, integral membrane subunit Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPY8_PSEUX
Binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AHF76585.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
PLM3_30_b1_sep16_scaffold_1347_12
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11702..12283
DNA (582bp) protein (194aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Q3_CONWI
Binding protein dependent transporter
Binding protein dependent transporter {ECO:0000313|EMBL:AHF76586.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
Displaying 12 items

View Taxonomy