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PLM3_30_b1_sep16_scaffold_1624

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1624_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(109..1077)
DNA (969bp) protein (323aa)
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
magnesium and cobalt transport protein CorA; K03284 magnesium transporter bin=bin7_NC10_sister species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
corA2; magnesium transport protein CorA
PLM3_30_b1_sep16_scaffold_1624_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1155..3374)
DNA (2220bp) protein (740aa)
Putative oxidoreductase subunit protein Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YST2_BRASO
oxidoreductase subunit protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_30_b1_sep16_scaffold_1624_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3376..3843)
DNA (468bp) protein (156aa)
Isoquinoline 1-oxidoreductase alpha subunit (EC:1.3.99.16)
(2Fe-2S)-binding protein Tax=Burkholderia ubonensis RepID=UPI00016A6B6B
(2Fe-2S)-binding protein {ECO:0000313|EMBL:EQL41183.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
PLM3_30_b1_sep16_scaffold_1624_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3920..5059)
DNA (1140bp) protein (380aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Queuine tRNA-ribosyltransferase Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAI7_STAND
PLM3_30_b1_sep16_scaffold_1624_5
unknown

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comp(5236..5460)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1624_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5577..6647)
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Afipia sp. 1NLS2 RepID=D6V6R0_9BRAD
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
PLM3_30_b1_sep16_scaffold_1624_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6692..7669
DNA (978bp) protein (326aa)
Glycosyl transferase, family 9 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WS6_RHOPB
glycosyl transferase family protein
Glycosyl transferase, family 9 {ECO:0000313|EMBL:ABD90410.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_30_b1_sep16_scaffold_1624_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7739..8197)
DNA (459bp) protein (153aa)
ppi2; peptidyl-prolyl cis-trans isomerase Ppi (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase Tax=Methyloferula stellata RepID=UPI00036A49E4
Uncharacterized protein {ECO:0000313|EMBL:EKS38079.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PLM3_30_b1_sep16_scaffold_1624_9
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8173..8655)
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137B0_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ29191.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
PLM3_30_b1_sep16_scaffold_1624_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8652..9206)
DNA (555bp) protein (185aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Peptidyl-prolyl cis-trans isomerase Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCN4_9BRAD
cyclophilin type peptidyl-prolyl cis-trans isomerase
PLM3_30_b1_sep16_scaffold_1624_11
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9277..9801)
DNA (525bp) protein (175aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Phosphopantetheine adenylyltransferase Tax=Bradyrhizobium sp. S23321 RepID=I0G7C5_9BRAD
coaD; phosphopantetheine adenylyltransferase
PLM3_30_b1_sep16_scaffold_1624_12
unknown

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10044..10337
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1624_13
bacterium YEK0313, Bacteria

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10472..11149
DNA (678bp) protein (226aa)
Ankyrin repeat-containing protein Tax=Microvirga sp. WSM3557 RepID=I4Z0R5_9RHIZ
Ankyrin repeats (3 copies) {ECO:0000313|EMBL:CEJ13727.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
ankyrin
Displaying 13 items

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