ggKbase home page

PLM3_30_b1_sep16_scaffold_4034

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_4034_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..536)
DNA (534bp) protein (178aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07P35_RHOP5
PLM3_30_b1_sep16_scaffold_4034_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628..966
DNA (339bp) protein (113aa)
Periplasmic divalent cation tolerance protein cutA Tax=Rhodovulum sp. PH10 RepID=J6JG13_9RHOB
Periplasmic divalent cation tolerance protein cutA {ECO:0000313|EMBL:EJW13615.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
CutA1 divalent ion tolerance protein
PLM3_30_b1_sep16_scaffold_4034_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1084..1641)
DNA (558bp) protein (186aa)
TPR repeat Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134M8_RHOPS
TPR repeat-containing protein
TPR repeat {ECO:0000313|EMBL:ABE40461.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_30_b1_sep16_scaffold_4034_4
bacterium YEK0313, Bacteria

Not on your lists

comp(1840..3801)
DNA (1962bp) protein (654aa)
Outer membrane cobalamin receptor protein Tax=Phyllobacterium sp. YR531 RepID=J2V1G5_9RHIZ
Vitamin B12 transporter BtuB {ECO:0000313|EMBL:CEJ12689.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
TonB-denpendent receptor
PLM3_30_b1_sep16_scaffold_4034_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4396..5370)
DNA (975bp) protein (325aa)
Zn-dependent hydrolase, glyoxylase Tax=Microvirga sp. WSM3557 RepID=I4YW80_9RHIZ
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EIM28222.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
beta-lactamase
PLM3_30_b1_sep16_scaffold_4034_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5455..6420)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Microvirga sp. WSM3557 RepID=I4YP91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25783.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_4034_7
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6448..7302)
DNA (855bp) protein (285aa)
Putative exonuclease of the beta-lactamase fold involved in RNA processing Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G379_ECHVK
exonuclease
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:AGA80679.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Displaying 7 items

View Taxonomy