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PLM3_30_b1_sep16_scaffold_5258

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_5258_1
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..696)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003769A12
nitrate ABC transporter substrate-binding protein
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE04766.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM3_30_b1_sep16_scaffold_5258_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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817..1638
DNA (822bp) protein (274aa)
Putative ABC transporter (ATP binding subunit) Tax=Azospirillum brasilense Sp245 RepID=G8AR53_AZOBR
putative ABC transporter (ATP binding subunit)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_30_b1_sep16_scaffold_5258_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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1631..2164
DNA (534bp) protein (178aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037CAFAB
tauC; sulfonate/nitrate/taurine transport system permease protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_30_b1_sep16_scaffold_5258_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2104..2397
DNA (294bp) protein (98aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00036D03B3
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFI50767.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ABC transporter
PLM3_30_b1_sep16_scaffold_5258_5
unknown

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comp(2569..2829)
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5258_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3035..3808)
DNA (774bp) protein (258aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Hydroxypyruvate isomerase Tax=Mesorhizobium sp. STM 4661 RepID=M5FMC7_9RHIZ
xylose isomerase-like TIM barrel family protein
PLM3_30_b1_sep16_scaffold_5258_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4218..5627
DNA (1410bp) protein (470aa)
Uncharacterized protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4F3_POLGS
Uncharacterized protein {ECO:0000313|EMBL:ETR76308.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5258_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5630..6568
DNA (939bp) protein (313aa)
Methylenetetrahydrofolate reductase Tax=Novosphingobium sp. PP1Y RepID=F6IE34_9SPHN
methylenetetrahydrofolate reductase
Tax=RBG_16_Gamma2_60_9_curated
PLM3_30_b1_sep16_scaffold_5258_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6575..8002)
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00035FF910
Uncharacterized protein {ECO:0000313|EMBL:KJC55520.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5258_10
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8137..8439)
DNA (303bp) protein (101aa)
Short-chain dehydrogenase/reductase SDR Tax=Jannaschia sp. (strain CCS1) RepID=Q28KQ8_JANSC
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABD56704.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
PLM3_30_b1_sep16_scaffold_5258_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8400..8819)
DNA (420bp) protein (140aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO55787.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO55787.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000380B355
short-chain dehydrogenase/reductase SDR
PLM3_30_b1_sep16_scaffold_5258_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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8911..9450
DNA (540bp) protein (180aa)
PEP2 protein-like protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2J3_POLGS
PEP2 protein-like protein
PEP2 protein-like protein {ECO:0000313|EMBL:ADZ70907.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 12 items

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