ggKbase home page

PLM3_30_b1_sep16_scaffold_5527

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_5527_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Triosephosphate isomerase Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D972_BRAJP
triosephosphate isomerase
PLM3_30_b1_sep16_scaffold_5527_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1120..2172
DNA (1053bp) protein (351aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215B7_RHOPB
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM3_30_b1_sep16_scaffold_5527_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2172..3689
DNA (1518bp) protein (506aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase, aminase component Tax=Rhodovulum sp. PH10 RepID=J6J8J5_9RHOB
Anthranilate synthase, aminase component {ECO:0000313|EMBL:EJW12160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
PLM3_30_b1_sep16_scaffold_5527_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..4819)
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00035E71AB
Uncharacterized protein {ECO:0000313|EMBL:EGW51757.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ribosomal protein L11 methylase
PLM3_30_b1_sep16_scaffold_5527_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4957..5559
DNA (603bp) protein (201aa)
Anthranilate synthase, amidotransferase component Tax=Rhodovulum sp. PH10 RepID=J5PP89_9RHOB
Anthranilate synthase, amidotransferase component {ECO:0000313|EMBL:EJW12167.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
glutamine amidotransferase of anthranilate synthase
PLM3_30_b1_sep16_scaffold_5527_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5570..6583
DNA (1014bp) protein (338aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Rhodovulum sp. PH10 RepID=J6LGT5_9RHOB
PLM3_30_b1_sep16_scaffold_5527_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6583..7401
DNA (819bp) protein (273aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Indole-3-glycerol phosphate synthase Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYZ3_POLGS
trpC; indole-3-glycerol phosphate synthase
PLM3_30_b1_sep16_scaffold_5527_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7406..7888
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Bradyrhizobium sp. YR681 RepID=J3I212_9BRAD
moaC; molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
PLM3_30_b1_sep16_scaffold_5527_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..8321
DNA (432bp) protein (144aa)
molybdenum cofactor biosynthesis protein MoaA Tax=Bradyrhizobium japonicum RepID=UPI00036579C4
moeA; molybdopterin biosynthesis protein
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:BAC50090.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_30_b1_sep16_scaffold_5527_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8318..9052
DNA (735bp) protein (245aa)
molybdenum cofactor biosynthesis protein MoaA Tax=Afipia birgiae RepID=UPI0002E0C281
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:EJW12171.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
moeA; molybdopterin biosynthesis protein
PLM3_30_b1_sep16_scaffold_5527_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9102..9791
DNA (690bp) protein (230aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
LexA repressor Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=LEXA_BRADU
PLM3_30_b1_sep16_scaffold_5527_12
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9851..10942)
DNA (1092bp) protein (364aa)
Putative ComEC/Rec2 family protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUX3_9BRAD
Putative ComEC/Rec2 family protein {ECO:0000313|EMBL:CCD85750.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
ComEC/Rec2 family protein
Displaying 12 items

View Taxonomy