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PLM3_30_b1_sep16_scaffold_9763

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_9763_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1033
DNA (1032bp) protein (344aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-isopropylmalate dehydratase large subunit Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEUC_NITHX
PLM3_30_b1_sep16_scaffold_9763_2

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1139..1630
DNA (492bp) protein (164aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036AF19B
Marine sediment metagenome DNA, contig: S01H1_L00403 {ECO:0000313|EMBL:GAF83080.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phenylalanyl-tRNA synthetase beta subunit
PLM3_30_b1_sep16_scaffold_9763_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1745..2497
DNA (753bp) protein (251aa)
Blr2470 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SD0_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ67949.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_30_b1_sep16_scaffold_9763_4
unknown

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comp(2689..2880)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_9763_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2975..3850)
DNA (876bp) protein (292aa)
coproporphyrinogen III oxidase (EC:1.3.3.3)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Coproporphyrinogen-III oxidase, aerobic Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPB7_NITWN
PLM3_30_b1_sep16_scaffold_9763_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3877..4773)
DNA (897bp) protein (299aa)
Monooxygenase FAD-binding protein Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXV7_HYPDA
FAD-binding monooxygenase protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:ADJ23316.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 6 items

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