ggKbase home page

PLM3_30_b1_sep16_scaffold_3000

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3000_trna_1
unknown

Not on your lists

comp(4..77)
DNA (74bp)
transferRNA Arg
PLM3_30_b1_sep16_scaffold_3000_1
unknown

Not on your lists

comp(130..405)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3000_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

615..1076
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Afipia clevelandensis ATCC 49720 RepID=K8PH77_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38890.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3000_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1206..2249
DNA (1044bp) protein (348aa)
NMT1/THI5 like domain protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IA10_METNO
NMT1/THI5 like domain-containing protein
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ACL57238.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_30_b1_sep16_scaffold_3000_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2378..3586
DNA (1209bp) protein (403aa)
Fosmidomycin resistance protein Tax=Oceanibaculum indicum P24 RepID=K2JPL3_9PROT
major facilitator transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_30_b1_sep16_scaffold_3000_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3725..4147
DNA (423bp) protein (141aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBE3_HYPSM
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CCB63829.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_30_b1_sep16_scaffold_3000_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4144..5610)
DNA (1467bp) protein (489aa)
D-mannonate oxidoreductase, NAD-binding Tax=Azospirillum brasilense Sp245 RepID=G8AZX1_AZOBR
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AIB16428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_30_b1_sep16_scaffold_3000_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5610..6896)
DNA (1287bp) protein (429aa)
TRAP dicarboxylate transporter subunit DctM Tax=Thauera sp. 63 RepID=N6Y1L7_9RHOO
dctM4; TRAP dicarboxylate transporter, subunit DctM
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_30_b1_sep16_scaffold_3000_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6902..7420)
DNA (519bp) protein (173aa)
tripartite ATP-independent periplasmic transporter DctQ bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
TRAP C4-dicarboxylate transport system subunit DctQ
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PLM3_30_b1_sep16_scaffold_3000_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7487..8482)
DNA (996bp) protein (332aa)
Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQB8_9BRAD
TRAP dicarboxylate family transporter subunit DctP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 10 items

View Taxonomy