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PLM3_30_b1_sep16_scaffold_3065

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3065_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..743)
DNA (741bp) protein (247aa)
Methyltransferase Tax=Azospirillum brasilense Sp245 RepID=G8AXC5_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB15818.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_30_b1_sep16_scaffold_3065_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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764..1528
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89M40_BRADU
kduD; 2-deoxy-D-gluconate 3-dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_30_b1_sep16_scaffold_3065_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1525..2487)
DNA (963bp) protein (321aa)
Putative ribonuclease BN-like family transmembrane protein {ECO:0000313|EMBL:CCD90550.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCD90550.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein Tax=Methyloferula stellata RepID=UPI00037D0628
ribonuclease BN
PLM3_30_b1_sep16_scaffold_3065_4
bacterium YEK0313, Bacteria

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comp(2683..4671)
DNA (1989bp) protein (663aa)
Methyl-accepting chemotaxis protein signaling domain Tax=Labrenzia alexandrii DFL-11 RepID=B9QSQ2_9RHOB
Methyl-accepting chemotaxis protein 4 {ECO:0000313|EMBL:CEJ10756.1}; species="Bacteria.;" source="bacterium YEK0313.;"
methyl accepting chemotaxis protein
PLM3_30_b1_sep16_scaffold_3065_5
bacterium YEK0313, Bacteria

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4907..6592
DNA (1686bp) protein (562aa)
Putative Methylsuccinyl-CoA dehydrogenase Tax=Rhodovulum sp. PH10 RepID=J6UHA6_9RHOB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ10758.1}; species="Bacteria.;" source="bacterium YEK0313.;"
isobutyryl-CoA dehydrogenase
PLM3_30_b1_sep16_scaffold_3065_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6754..6984
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0G5Y3_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL76170.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM3_30_b1_sep16_scaffold_3065_7
unknown

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7586..8041
DNA (456bp) protein (152aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_8
bacterium YEK0313, Bacteria

Not on your lists

comp(7922..9073)
DNA (1152bp) protein (384aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein (EC:2.5.1.48)
Cys/Met metabolism pyridoxal-phosphate-dependent protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8II01_METNO
Cystathionine gamma-synthase {ECO:0000313|EMBL:CEJ10761.1}; species="Bacteria.;" source="bacterium YEK0313.;"
PLM3_30_b1_sep16_scaffold_3065_9
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9162..9356
DNA (195bp) protein (65aa)
Hypoxia induced protein conserved region Tax=Bradyrhizobium sp. YR681 RepID=J3I2J5_9BRAD
Hypoxia induced protein conserved region {ECO:0000313|EMBL:EJN13286.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3065_10
unknown

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comp(9407..9610)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9683..10258
DNA (576bp) protein (192aa)
ATP:cob(I)alamin adenosyltransferase Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WT3_RHOPB
ATP
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABD90403.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_30_b1_sep16_scaffold_3065_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10269..11006
DNA (738bp) protein (246aa)
Rhomboid family protein Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHB1_XANP2
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABS67404.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
PLM3_30_b1_sep16_scaffold_3065_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11080..11829
DNA (750bp) protein (250aa)
electron transfer flavoprotein subunit beta Tax=Bradyrhizobium japonicum RepID=UPI00037CE902
electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACF03720.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
PLM3_30_b1_sep16_scaffold_3065_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11830..12774
DNA (945bp) protein (315aa)
Electron transfer flavoprotein alpha subunit Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QCB8_RHOPT
electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACF03719.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
PLM3_30_b1_sep16_scaffold_3065_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12815..13756
DNA (942bp) protein (314aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HB54_9BRAD
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERF81686.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PLM3_30_b1_sep16_scaffold_3065_16
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13850..13969)
DNA (120bp) protein (40aa)
Antitoxin {ECO:0000313|EMBL:KDR37700.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
PLM3_30_b1_sep16_scaffold_3065_17
unknown

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14033..14248
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_18
unknown

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14203..14388
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_19
unknown

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14467..14658
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_20
unknown

Not on your lists

14685..15434
DNA (750bp) protein (250aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3065_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15435..15788)
DNA (354bp) protein (118aa)
Thiol-disulfide isomerase-like thioredoxin Tax=Bradyrhizobium sp. YR681 RepID=J2W3R2_9BRAD
Thiol:disulfide interchange protein {ECO:0000313|EMBL:ETR77092.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
thioredoxin-like protein
Displaying 21 items

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