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PLM3_30_b1_sep16_scaffold_3707

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3707_1
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..295)
DNA (294bp) protein (98aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE2DC
Cobalamin-independent synthase, Catalytic domain
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_30_b1_sep16_scaffold_3707_2
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(276..1805)
DNA (1530bp) protein (510aa)
AMP-dependent synthetase and ligase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUY9_RHOCS
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3_30_b1_sep16_scaffold_3707_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1960..2778)
DNA (819bp) protein (273aa)
dienelactone hydrolase Tax=Bradyrhizobium japonicum RepID=UPI00036EEA69
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJN15903.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
putative dienelactone hydrolase family protein
PLM3_30_b1_sep16_scaffold_3707_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2886..3116
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J9A1I5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09605.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3707_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3103..4092)
DNA (990bp) protein (330aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Tetraacyldisaccharide 4'-kinase Tax=Rhodopseudomonas palustris (strain BisB5) RepID=LPXK_RHOPS
PLM3_30_b1_sep16_scaffold_3707_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4168..5460)
DNA (1293bp) protein (431aa)
Three-deoxy-D-manno-octulosonic-acid transferase-like Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XA9_RHOPB
three-deoxy-D-manno-octulosonic-acid transferase-like protein
3-deoxy-D-manno-octulosonic acid transferase {ECO:0000313|EMBL:ETR78531.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
PLM3_30_b1_sep16_scaffold_3707_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5634..5885)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TCX9_9BRAD
Inositol monophosphatase {ECO:0000313|EMBL:ETR78529.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3707_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5997..6338)
DNA (342bp) protein (114aa)
Bll7516 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DC3_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR58658.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
PLM3_30_b1_sep16_scaffold_3707_9
unknown

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comp(6328..6531)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3707_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6587..7417)
DNA (831bp) protein (277aa)
Putative myo-inositol monophosphatase 2 family protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I692_AZOC5
myo-inositol monophosphatase 2 family protein
Putative myo-inositol monophosphatase 2 family protein {ECO:0000313|EMBL:BAF88377.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_30_b1_sep16_scaffold_3707_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7404..8756)
DNA (1353bp) protein (451aa)
Peptidase U62, modulator of DNA gyrase Tax=Nitrobacter sp. Nb-311A RepID=A3X1H1_9BRAD
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:EAQ33919.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
C69 family peptidase
PLM3_30_b1_sep16_scaffold_3707_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9026..9664
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6J3F3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11185.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3707_13
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9661..10107)
DNA (447bp) protein (149aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
peptidylprolyl isomerase, FKBP-type (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Bradyrhizobium sp. WSM1253 RepID=I2QEW6_9BRAD
PLM3_30_b1_sep16_scaffold_3707_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10342..11397
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0U974_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA15345.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM3_30_b1_sep16_scaffold_3707_15
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11394..12329)
DNA (936bp) protein (312aa)
ubiA; 4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
4-hydroxybenzoate octaprenyltransferase Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ECK0_BRASB
PLM3_30_b1_sep16_scaffold_3707_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12326..12877)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TA4_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04830.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
PLM3_30_b1_sep16_scaffold_3707_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13046..13804
DNA (759bp) protein (253aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Ribosomal RNA small subunit methyltransferase E Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VGA8_RHOPX
hypothetical protein
Displaying 17 items

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