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PLM3_30_b1_sep16_scaffold_5110

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_5110_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..481
DNA (480bp) protein (160aa)
Two component transcriptional regulator, LytTR family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PA86_CHIPD
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC94285.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
LytTR family two component transcriptional regulator
PLM3_30_b1_sep16_scaffold_5110_2
unknown

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770..1054
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5110_3
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1133..1534
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A085_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07689.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
PLM3_30_b1_sep16_scaffold_5110_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1619..2689
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FM30_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIC93460.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_5110_5
unknown

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comp(3171..3398)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_5110_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3769..4641)
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T829_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97980.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_5110_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4742..7090)
DNA (2349bp) protein (783aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000256|RuleBase:RU000518};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DNA topoisomerase 1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC68_CHIPD
DNA topoisomerase I
PLM3_30_b1_sep16_scaffold_5110_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7246..7971
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T832_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97983.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_5110_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7973..8968
DNA (996bp) protein (332aa)
Urea amidolyase related protein {ECO:0000313|EMBL:AEV97984.1}; EC=6.3.4.6 {ECO:0000313|EMBL:AEV97984.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Urea amidolyase related protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T833_NIAKG
urea amidolyase-like protein
PLM3_30_b1_sep16_scaffold_5110_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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8956..9696
DNA (741bp) protein (247aa)
LamB/YcsF family protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPP8_HALH1
LamB/YcsF family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_5110_11
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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9677..10093
DNA (417bp) protein (139aa)
Permease (Transport protein) Tax=Actinobacillus minor NM305 RepID=C5S064_9PAST
Permease (Transport protein) {ECO:0000313|EMBL:EER47581.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus minor NM305.;"
membrane protein
Displaying 11 items

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