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PLM3_30_b1_sep16_scaffold_2087

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2087_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1641)
DNA (1641bp) protein (547aa)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEV96821.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEV96821.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methylcrotonoyl-CoA carboxylase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT7_NIAKG
methylcrotonoyl-CoA carboxylase
PLM3_30_b1_sep16_scaffold_2087_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1732..2811
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6I0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96825.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2908..3444)
DNA (537bp) protein (179aa)
dCTP deaminase {ECO:0000313|EMBL:AEV96826.1}; EC=3.5.4.13 {ECO:0000313|EMBL:AEV96826.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
dCTP deaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6I1_NIAKG
dCTP deaminase
PLM3_30_b1_sep16_scaffold_2087_4
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

3507..4148
DNA (642bp) protein (214aa)
4'-phosphopantetheinyl transferase Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRU8_9BACT
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:EDK72842.1}; species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
4'-phosphopantetheinyl transferase
PLM3_30_b1_sep16_scaffold_2087_5
unknown

Not on your lists

comp(4275..4409)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4526..5797)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFX0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ20129.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2087_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6141..6413
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLM5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96594.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6424..6798
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLM6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96595.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_9
unknown

Not on your lists

6785..7057
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7244..9610)
DNA (2367bp) protein (789aa)
TonB-denpendent receptor Tax=Spirosoma panaciterrae RepID=UPI00037BFE55
TonB-dependent receptor {ECO:0000313|EMBL:CCH52714.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
PLM3_30_b1_sep16_scaffold_2087_11
unknown

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comp(10014..10457)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_12
unknown

Not on your lists

comp(10499..10816)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10993..11583
DNA (591bp) protein (197aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI00035F0028
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH54353.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_30_b1_sep16_scaffold_2087_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11605..12336
DNA (732bp) protein (244aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI0003820290
Uncharacterized protein {ECO:0000313|EMBL:CCH54352.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
PLM3_30_b1_sep16_scaffold_2087_15
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12418..13626
DNA (1209bp) protein (403aa)
Subtilase family peptidase Tax=Nodularia spumigena CCY9414 RepID=A0ZBC2_NODSP
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_30_b1_sep16_scaffold_2087_16
unknown

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13661..14359
DNA (699bp) protein (233aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_17
unknown

Not on your lists

14356..15546
DNA (1191bp) protein (397aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2087_18
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15569..17182
DNA (1614bp) protein (538aa)
Uncharacterized protein Tax=Indibacter alkaliphilus LW1 RepID=S2DSW2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ95146.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2087_19
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17234..17956)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNU2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93175.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
S-isoprenylcysteine methyltransferase-like protein
PLM3_30_b1_sep16_scaffold_2087_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17953..18705)
DNA (753bp) protein (251aa)
SAM-dependent methlyltransferase Tax=Hymenobacter norwichensis RepID=UPI0003B69589
tRNA (Uridine-5-oxyacetic acid methyl ester) 34 synthase {ECO:0000313|EMBL:EOR93176.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
methyltransferase
PLM3_30_b1_sep16_scaffold_2087_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18745..20307)
DNA (1563bp) protein (521aa)
Acriflavin resistance protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER8_NIAKG
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEW00504.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20315..21625)
DNA (1311bp) protein (437aa)
Acriflavin resistance protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER8_NIAKG
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEW00504.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21639..22565)
DNA (927bp) protein (309aa)
RND family efflux transporter MFP subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER9_NIAKG
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEW00505.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22562..23803)
DNA (1242bp) protein (414aa)
Outer membrane protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TES0_NIAKG
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AEW00506.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23859..24311)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00498.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2087_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24393..25391)
DNA (999bp) protein (333aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9X5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31158.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2087_27
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25547..26689)
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003693FD5
Uncharacterized protein {ECO:0000313|EMBL:ETZ23395.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
histidine kinase A domain-containing protein
PLM3_30_b1_sep16_scaffold_2087_28
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26686..27420)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003721C20
arlR; Response regulator ArlR
Transcriptional regulator {ECO:0000313|EMBL:KGO09625.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
PLM3_30_b1_sep16_scaffold_2087_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27511..28416
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0RLB0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO44666.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2087_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28594..29313
DNA (720bp) protein (240aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FTL3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC96011.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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