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PLM3_30_b1_sep16_scaffold_2588

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2588_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..1383
DNA (1383bp) protein (461aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glycine dehydrogenase (decarboxylating) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFA6_NIAKG
Glycine dehydrogenase (decarboxylating)
PLM3_30_b1_sep16_scaffold_2588_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1541..3979)
DNA (2439bp) protein (813aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ET37_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02840.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_2588_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4751..5584
DNA (834bp) protein (278aa)
Aminotransferase class IV Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWV6_PEDHD
class IV aminotransferase
Aminotransferase class IV {ECO:0000313|EMBL:ACU04250.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
PLM3_30_b1_sep16_scaffold_2588_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5813..6451)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THK1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97429.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2588_5
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7970..8815
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQF9_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06575.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_2588_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8893..9342
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQF8_SOLCM
Chromate resistance protein {ECO:0000313|EMBL:KIC96230.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2588_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9545..10015
DNA (471bp) protein (157aa)
ferritin Dps family protein Tax=Dyadobacter beijingensis RepID=UPI0003745098
Dps family ferritin {ECO:0000313|EMBL:KIC93884.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ferritin Dps family protein
PLM3_30_b1_sep16_scaffold_2588_8
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10352..11101)
DNA (750bp) protein (250aa)
Hydrolase, alpha/beta fold family Tax=Flavobacterium frigoris PS1 RepID=H7FT82_9FLAO
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EIA08136.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
alpha/beta hydrolase
PLM3_30_b1_sep16_scaffold_2588_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11424..12479
DNA (1056bp) protein (352aa)
Glycoside hydrolase family 5 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFL9_9SPHI
Glycosyl hydrolase family 5 {ECO:0000313|EMBL:KIC93846.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glycoside hydrolase family protein
PLM3_30_b1_sep16_scaffold_2588_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12574..13281
DNA (708bp) protein (236aa)
Chitinase {ECO:0000313|EMBL:AEW00737.1}; EC=3.2.1.14 {ECO:0000313|EMBL:AEW00737.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000370857D
chitinase
PLM3_30_b1_sep16_scaffold_2588_11
unknown

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comp(13278..13565)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2588_12
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13697..14431)
DNA (735bp) protein (245aa)
Predicted xylanase/chitin deacetilase Tax=Pedobacter sp. BAL39 RepID=A6EGZ0_9SPHI
Predicted xylanase/chitin deacetilase {ECO:0000313|EMBL:EDM35302.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
polysaccharide deacetylase
Displaying 12 items

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